Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.14□□□□□ -0.31
CDRT1O95170 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.14□□□□□ -0.31
CDRT1O95170 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CDRT1O95170 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CDRT1O95170 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.14□□□□□ -0.31
CDRT1O95170 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.14□□□□□ -0.31
CDRT1O95170 AC011498.7-201ENST00000624986 2027 ntBASIC13.14□□□□□ -0.31
CDRT1O95170 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CDRT1O95170 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CDRT1O95170 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CDRT1O95170 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.14□□□□□ -0.31
CDRT1O95170 UPF3AP3-201ENST00000420996 769 ntBASIC13.14□□□□□ -0.31
CDRT1O95170 BX842568.4-201ENST00000421222 227 ntBASIC13.14□□□□□ -0.31
CDRT1O95170 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.14□□□□□ -0.31
CDRT1O95170 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CDRT1O95170 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.14□□□□□ -0.31
CDRT1O95170 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.14□□□□□ -0.31
CDRT1O95170 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.14□□□□□ -0.31
CDRT1O95170 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.14□□□□□ -0.31
CDRT1O95170 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.14□□□□□ -0.31
CDRT1O95170 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.14□□□□□ -0.31
CDRT1O95170 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CDRT1O95170 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.14□□□□□ -0.31
CDRT1O95170 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.14□□□□□ -0.31
CDRT1O95170 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.14□□□□□ -0.31
CDRT1O95170 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CDRT1O95170 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.14□□□□□ -0.31
CDRT1O95170 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.14□□□□□ -0.31
CDRT1O95170 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.14□□□□□ -0.31
CDRT1O95170 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CDRT1O95170 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CDRT1O95170 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.14□□□□□ -0.31
CDRT1O95170 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CDRT1O95170 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
CDRT1O95170 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CDRT1O95170 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.13□□□□□ -0.31
CDRT1O95170 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CDRT1O95170 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CDRT1O95170 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.13□□□□□ -0.31
CDRT1O95170 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
CDRT1O95170 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.13□□□□□ -0.31
CDRT1O95170 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.13□□□□□ -0.31
CDRT1O95170 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.13□□□□□ -0.31
CDRT1O95170 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.13□□□□□ -0.31
CDRT1O95170 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CDRT1O95170 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.13□□□□□ -0.31
CDRT1O95170 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.13□□□□□ -0.31
CDRT1O95170 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.13□□□□□ -0.31
CDRT1O95170 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.13□□□□□ -0.31
CDRT1O95170 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.13□□□□□ -0.31
CDRT1O95170 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 AL512361.1-201ENST00000554200 418 ntBASIC13.13□□□□□ -0.31
CDRT1O95170 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
CDRT1O95170 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.13□□□□□ -0.31
CDRT1O95170 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CDRT1O95170 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
CDRT1O95170 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
CDRT1O95170 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.13□□□□□ -0.31
CDRT1O95170 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CDRT1O95170 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDRT1O95170 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.12□□□□□ -0.31
CDRT1O95170 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDRT1O95170 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
CDRT1O95170 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms