Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC17.01■□□□□ 0.31
CTNND1O60716 AC027237.1-201ENST00000560942 655 ntBASIC17.01■□□□□ 0.31
CTNND1O60716 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.01■□□□□ 0.31
CTNND1O60716 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CTNND1O60716 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNND1O60716 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CTNND1O60716 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
CTNND1O60716 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CTNND1O60716 AC013268.4-201ENST00000637413 2228 ntBASIC17.01■□□□□ 0.31
CTNND1O60716 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNND1O60716 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC17.01■□□□□ 0.31
CTNND1O60716 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTNND1O60716 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17.01■□□□□ 0.31
CTNND1O60716 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CTNND1O60716 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.01■□□□□ 0.31
CTNND1O60716 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNND1O60716 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTNND1O60716 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CTNND1O60716 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
CTNND1O60716 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTNND1O60716 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CTNND1O60716 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTNND1O60716 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTNND1O60716 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTNND1O60716 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTNND1O60716 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CTNND1O60716 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTNND1O60716 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTNND1O60716 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTNND1O60716 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17■□□□□ 0.31
CTNND1O60716 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CTNND1O60716 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTNND1O60716 HLA-DMA-203ENST00000395305 777 ntBASIC17■□□□□ 0.31
CTNND1O60716 AL627389.1-201ENST00000413508 1182 ntBASIC17■□□□□ 0.31
CTNND1O60716 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17■□□□□ 0.31
CTNND1O60716 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTNND1O60716 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC17■□□□□ 0.31
CTNND1O60716 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17■□□□□ 0.31
CTNND1O60716 AC018463.1-201ENST00000456674 917 ntBASIC17■□□□□ 0.31
CTNND1O60716 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTNND1O60716 TMCO5B-205ENST00000530020 894 ntBASIC17■□□□□ 0.31
CTNND1O60716 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CTNND1O60716 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC17■□□□□ 0.31
CTNND1O60716 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC17■□□□□ 0.31
CTNND1O60716 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CTNND1O60716 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC17■□□□□ 0.31
CTNND1O60716 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC17■□□□□ 0.31
CTNND1O60716 AC009084.3-201ENST00000623356 437 ntBASIC17■□□□□ 0.31
CTNND1O60716 AC005618.3-201ENST00000624928 458 ntBASIC17■□□□□ 0.31
CTNND1O60716 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CTNND1O60716 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17■□□□□ 0.31
CTNND1O60716 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTNND1O60716 AL109954.1-202ENST00000564051 2148 ntBASIC17■□□□□ 0.31
CTNND1O60716 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTNND1O60716 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17■□□□□ 0.31
CTNND1O60716 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTNND1O60716 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17■□□□□ 0.31
CTNND1O60716 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CTNND1O60716 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17■□□□□ 0.31
CTNND1O60716 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
CTNND1O60716 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CTNND1O60716 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CTNND1O60716 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC17■□□□□ 0.31
CTNND1O60716 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17■□□□□ 0.31
CTNND1O60716 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17■□□□□ 0.31
CTNND1O60716 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.99■□□□□ 0.31
CTNND1O60716 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.99■□□□□ 0.31
CTNND1O60716 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CTNND1O60716 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.99■□□□□ 0.31
CTNND1O60716 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CTNND1O60716 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.99■□□□□ 0.31
CTNND1O60716 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CTNND1O60716 PPT1-215ENST00000641471 2368 ntBASIC16.99■□□□□ 0.31
CTNND1O60716 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
CTNND1O60716 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.99■□□□□ 0.31
CTNND1O60716 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTNND1O60716 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTNND1O60716 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CTNND1O60716 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.99■□□□□ 0.31
CTNND1O60716 HIST2H2BA-201ENST00000412169 381 ntBASIC16.99■□□□□ 0.31
CTNND1O60716 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.99■□□□□ 0.31
CTNND1O60716 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.99■□□□□ 0.31
CTNND1O60716 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.99■□□□□ 0.31
CTNND1O60716 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.99■□□□□ 0.31
CTNND1O60716 AL161773.1-201ENST00000624845 863 ntBASIC16.99■□□□□ 0.31
CTNND1O60716 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.99■□□□□ 0.31
CTNND1O60716 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.99■□□□□ 0.31
CTNND1O60716 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CTNND1O60716 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.99■□□□□ 0.31
CTNND1O60716 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CTNND1O60716 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CTNND1O60716 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CTNND1O60716 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CTNND1O60716 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTNND1O60716 AC025271.4-201ENST00000621477 1726 ntBASIC16.99■□□□□ 0.31
CTNND1O60716 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNND1O60716 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTNND1O60716 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNND1O60716 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNND1O60716 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms