Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CENPBD1B2RD01 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CENPBD1B2RD01 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPBD1B2RD01 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CENPBD1B2RD01 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPBD1B2RD01 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.48□□□□□ -0.25
CENPBD1B2RD01 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.48□□□□□ -0.25
CENPBD1B2RD01 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPBD1B2RD01 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CENPBD1B2RD01 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPBD1B2RD01 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CENPBD1B2RD01 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
CENPBD1B2RD01 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CENPBD1B2RD01 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPBD1B2RD01 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPBD1B2RD01 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPBD1B2RD01 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CENPBD1B2RD01 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 AC236430.1-201ENST00000402231 743 ntBASIC13.47□□□□□ -0.25
CENPBD1B2RD01 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 ELK1P1-201ENST00000485699 580 ntBASIC13.47□□□□□ -0.25
CENPBD1B2RD01 GIMAP3P-201ENST00000495150 836 ntBASIC13.47□□□□□ -0.25
CENPBD1B2RD01 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 MIR4745-201ENST00000577608 62 ntBASIC13.47□□□□□ -0.25
CENPBD1B2RD01 SPDYE22P-201ENST00000582158 798 ntBASIC13.47□□□□□ -0.25
CENPBD1B2RD01 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 AL355385.1-201ENST00000606123 409 ntBASIC13.47□□□□□ -0.25
CENPBD1B2RD01 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 MTHFR-210ENST00000641407 2387 ntBASIC13.47□□□□□ -0.25
CENPBD1B2RD01 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CENPBD1B2RD01 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 MIR661-201ENST00000384842 89 ntBASIC13.46□□□□□ -0.25
CENPBD1B2RD01 ACTBP8-201ENST00000403258 1108 ntBASIC13.46□□□□□ -0.25
CENPBD1B2RD01 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.46□□□□□ -0.25
CENPBD1B2RD01 AC098850.1-201ENST00000419919 790 ntBASIC13.46□□□□□ -0.25
CENPBD1B2RD01 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.46□□□□□ -0.25
CENPBD1B2RD01 KRT18P25-201ENST00000508931 1278 ntBASIC13.46□□□□□ -0.25
CENPBD1B2RD01 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.46□□□□□ -0.25
CENPBD1B2RD01 AP001582.1-201ENST00000525856 295 ntBASIC13.46□□□□□ -0.25
CENPBD1B2RD01 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms