Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.75□□□□□ -0.37
MBD3L3A6NE82 AL627422.1-201ENST00000434104 580 ntBASIC12.75□□□□□ -0.37
MBD3L3A6NE82 RN7SL81P-201ENST00000493781 261 ntBASIC12.75□□□□□ -0.37
MBD3L3A6NE82 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 IQSEC3P1-201ENST00000538799 536 ntBASIC12.75□□□□□ -0.37
MBD3L3A6NE82 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 MIR4522-201ENST00000584932 87 ntBASIC12.75□□□□□ -0.37
MBD3L3A6NE82 AC092171.5-201ENST00000608012 942 ntBASIC12.75□□□□□ -0.37
MBD3L3A6NE82 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.74□□□□□ -0.37
MBD3L3A6NE82 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 AP002803.1-201ENST00000528836 498 ntBASIC12.74□□□□□ -0.37
MBD3L3A6NE82 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 YRDCP1-201ENST00000621419 643 ntBASIC12.74□□□□□ -0.37
MBD3L3A6NE82 AC011491.1-203ENST00000637688 543 ntBASIC12.74□□□□□ -0.37
MBD3L3A6NE82 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 BRD7P5-201ENST00000299197 1822 ntBASIC12.74□□□□□ -0.37
MBD3L3A6NE82 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L3A6NE82 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 IGF1-203ENST00000392904 761 ntTSL 5 BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms