Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC162PA2VCL2 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
CCDC162PA2VCL2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC162PA2VCL2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC162PA2VCL2 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC162PA2VCL2 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC162PA2VCL2 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC162PA2VCL2 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC162PA2VCL2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.71□□□□□ -0.06
CCDC162PA2VCL2 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC162PA2VCL2 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 ANKRD19P-201ENST00000338192 862 ntBASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 BOLA2P3-201ENST00000404566 256 ntBASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 AC234783.1-201ENST00000441761 496 ntBASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 CHMP1AP1-201ENST00000445563 662 ntBASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 SNX29P1-201ENST00000548357 1007 ntBASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 MIR6074-201ENST00000612054 107 ntBASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 ZACNP1-201ENST00000612259 710 ntBASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 AC138969.2-201ENST00000532739 9932 ntBASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC162PA2VCL2 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 MIR1909-201ENST00000411312 80 ntBASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 CNN2P10-201ENST00000443067 918 ntBASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC162PA2VCL2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms