Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 SERPINA13P-202ENST00000478994 924 ntBASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 DUX4L46-201ENST00000566845 751 ntBASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 AC008825.2-201ENST00000603374 718 ntBASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 AL162426.1-201ENST00000624141 743 ntBASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 MYADML-201ENST00000474610 2147 ntBASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
COL4A3BPQ9Y5P4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 AC100827.2-201ENST00000563214 1194 ntBASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 AL451050.2-201ENST00000606967 682 ntBASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 AL023803.2-201ENST00000620080 638 ntBASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 AC244452.3-201ENST00000636814 210 ntBASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 LINC01230-201ENST00000625222 3017 ntBASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
COL4A3BPQ9Y5P4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms