Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 AC009542.2-202ENST00000619004 1067 ntBASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.97□□□□□ -0.17
PCDHGB6Q9Y5F9 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 LRRC59-203ENST00000576448 1531 ntBASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 AC091271.1-201ENST00000611877 1162 ntBASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 ENPP7P14-201ENST00000621765 1040 ntBASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 CICP11-201ENST00000434745 2827 ntBASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 AC089987.1-201ENST00000551654 2209 ntBASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHGB6Q9Y5F9 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PCDHGB6Q9Y5F9 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.96□□□□□ -0.18
PCDHGB6Q9Y5F9 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
PCDHGB6Q9Y5F9 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.96□□□□□ -0.18
PCDHGB6Q9Y5F9 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PCDHGB6Q9Y5F9 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PCDHGB6Q9Y5F9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PCDHGB6Q9Y5F9 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
PCDHGB6Q9Y5F9 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
PCDHGB6Q9Y5F9 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.96□□□□□ -0.18
PCDHGB6Q9Y5F9 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PCDHGB6Q9Y5F9 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
PCDHGB6Q9Y5F9 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms