Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 RN7SL560P-201ENST00000577943 264 ntBASIC12.48□□□□□ -0.41
CLN8Q9UBY8 RN7SL219P-201ENST00000582872 296 ntBASIC12.48□□□□□ -0.41
CLN8Q9UBY8 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 AC009542.2-202ENST00000619004 1067 ntBASIC12.48□□□□□ -0.41
CLN8Q9UBY8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 AC092053.3-201ENST00000641308 4975 ntBASIC12.48□□□□□ -0.41
CLN8Q9UBY8 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 CNN2P10-201ENST00000443067 918 ntBASIC12.47□□□□□ -0.41
CLN8Q9UBY8 Z93015.1-201ENST00000451718 390 ntBASIC12.47□□□□□ -0.41
CLN8Q9UBY8 AL391280.1-201ENST00000506969 1062 ntBASIC12.47□□□□□ -0.41
CLN8Q9UBY8 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 RN7SL713P-201ENST00000582127 302 ntBASIC12.47□□□□□ -0.41
CLN8Q9UBY8 AC004466.1-201ENST00000599515 1080 ntBASIC12.47□□□□□ -0.41
CLN8Q9UBY8 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 AC041040.2-201ENST00000622926 2899 ntBASIC12.47□□□□□ -0.41
CLN8Q9UBY8 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLN8Q9UBY8 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLN8Q9UBY8 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
CLN8Q9UBY8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
CLN8Q9UBY8 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLN8Q9UBY8 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms