Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 PUDPP3-201ENST00000445368 636 ntBASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 ALG3P1-201ENST00000508806 1114 ntBASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 AL136301.1-201ENST00000615830 422 ntBASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 AC015967.2-201ENST00000624092 234 ntBASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 AC006435.4-201ENST00000625037 234 ntBASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 AL356737.1-201ENST00000634391 234 ntBASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 AGGF1P1-201ENST00000509500 2073 ntBASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 AC015688.4-201ENST00000580780 1647 ntBASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 AC006504.5-208ENST00000588784 2401 ntBASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 AL137784.3-201ENST00000623858 2288 ntBASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CUEDC1Q9NWM3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms