Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 AL512343.1-201ENST00000605837 169 ntBASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 REXO1L6P-201ENST00000603433 1515 ntBASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 AL080243.2-201ENST00000418783 582 ntBASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 AC234783.1-201ENST00000441761 496 ntBASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 RN7SL837P-201ENST00000463010 287 ntBASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 MIR4259-201ENST00000584466 101 ntBASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 AL033527.5-202ENST00000641632 1098 ntBASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 KRT8P35-201ENST00000483942 1338 ntBASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCM2LQ9NUG4 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.02□□□□□ -0.16
CCM2LQ9NUG4 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.02□□□□□ -0.16
CCM2LQ9NUG4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCM2LQ9NUG4 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCM2LQ9NUG4 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCM2LQ9NUG4 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCM2LQ9NUG4 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
CCM2LQ9NUG4 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.02□□□□□ -0.16
CCM2LQ9NUG4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCM2LQ9NUG4 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCM2LQ9NUG4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCM2LQ9NUG4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.02□□□□□ -0.16
CCM2LQ9NUG4 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCM2LQ9NUG4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCM2LQ9NUG4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.02□□□□□ -0.16
CCM2LQ9NUG4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCM2LQ9NUG4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.02□□□□□ -0.16
CCM2LQ9NUG4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCM2LQ9NUG4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCM2LQ9NUG4 FAM86MP-201ENST00000340703 885 ntBASIC14.02□□□□□ -0.17
CCM2LQ9NUG4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms