Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 AL355864.2-201ENST00000447420 863 ntBASIC13.55□□□□□ -0.24
TRIM2Q9C040 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 ALG3P1-201ENST00000508806 1114 ntBASIC13.55□□□□□ -0.24
TRIM2Q9C040 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 RPSAP52-203ENST00000622976 1023 ntBASIC13.55□□□□□ -0.24
TRIM2Q9C040 AC132938.4-201ENST00000623835 848 ntBASIC13.55□□□□□ -0.24
TRIM2Q9C040 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 RN7SL832P-201ENST00000607781 1756 ntBASIC13.55□□□□□ -0.24
TRIM2Q9C040 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 AC006504.5-208ENST00000588784 2401 ntBASIC13.54□□□□□ -0.24
TRIM2Q9C040 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 MIR1909-201ENST00000411312 80 ntBASIC13.54□□□□□ -0.24
TRIM2Q9C040 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 AC103988.2-201ENST00000561804 725 ntBASIC13.54□□□□□ -0.24
TRIM2Q9C040 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 AL512343.1-201ENST00000605837 169 ntBASIC13.54□□□□□ -0.24
TRIM2Q9C040 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 AP001002.3-201ENST00000623482 206 ntBASIC13.54□□□□□ -0.24
TRIM2Q9C040 MIR193BHG-211ENST00000641433 5365 ntBASIC13.54□□□□□ -0.24
TRIM2Q9C040 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM2Q9C040 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
TRIM2Q9C040 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms