Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CCL13Q99616 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL13Q99616 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
CCL13Q99616 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.31□□□□□ -0.44
CCL13Q99616 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL13Q99616 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.31□□□□□ -0.44
CCL13Q99616 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CCL13Q99616 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.31□□□□□ -0.44
CCL13Q99616 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CCL13Q99616 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 BRWD1P1-201ENST00000401091 371 ntBASIC12.31□□□□□ -0.44
CCL13Q99616 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.31□□□□□ -0.44
CCL13Q99616 BTBD6P1-201ENST00000412176 1267 ntBASIC12.31□□□□□ -0.44
CCL13Q99616 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CCL13Q99616 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CCL13Q99616 TPT1P11-201ENST00000458482 498 ntBASIC12.31□□□□□ -0.44
CCL13Q99616 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL13Q99616 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.31□□□□□ -0.44
CCL13Q99616 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.31□□□□□ -0.44
CCL13Q99616 AC103988.2-201ENST00000561804 725 ntBASIC12.31□□□□□ -0.44
CCL13Q99616 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.31□□□□□ -0.44
CCL13Q99616 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.31□□□□□ -0.44
CCL13Q99616 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.31□□□□□ -0.44
CCL13Q99616 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CCL13Q99616 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CCL13Q99616 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 AC005912.2-201ENST00000619492 2400 ntBASIC12.31□□□□□ -0.44
CCL13Q99616 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CCL13Q99616 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CCL13Q99616 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL13Q99616 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL13Q99616 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
CCL13Q99616 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CCL13Q99616 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL13Q99616 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CCL13Q99616 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.3□□□□□ -0.44
CCL13Q99616 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL13Q99616 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CCL13Q99616 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CCL13Q99616 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL13Q99616 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.3□□□□□ -0.44
CCL13Q99616 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL13Q99616 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL13Q99616 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
CCL13Q99616 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
CCL13Q99616 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL13Q99616 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
CCL13Q99616 AC010141.1-201ENST00000411585 623 ntBASIC12.3□□□□□ -0.44
CCL13Q99616 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
CCL13Q99616 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL13Q99616 AL035414.1-201ENST00000451327 857 ntBASIC12.3□□□□□ -0.44
CCL13Q99616 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL13Q99616 RPSAP36-202ENST00000494591 1261 ntBASIC12.3□□□□□ -0.44
CCL13Q99616 FAM86HP-204ENST00000513466 959 ntBASIC12.3□□□□□ -0.44
CCL13Q99616 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.3□□□□□ -0.44
CCL13Q99616 DUX4L46-201ENST00000566845 751 ntBASIC12.3□□□□□ -0.44
CCL13Q99616 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.3□□□□□ -0.44
CCL13Q99616 AL033527.4-201ENST00000641026 673 ntBASIC12.3□□□□□ -0.44
CCL13Q99616 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms