Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
MUC4Q99102 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC10.77□□□□□ -0.69
MUC4Q99102 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC10.77□□□□□ -0.69
MUC4Q99102 C1QBPP1-201ENST00000400117 770 ntBASIC10.77□□□□□ -0.69
MUC4Q99102 KLF2P2-201ENST00000416807 1039 ntBASIC10.77□□□□□ -0.69
MUC4Q99102 BNIP3P42-201ENST00000454982 569 ntBASIC10.77□□□□□ -0.69
MUC4Q99102 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
MUC4Q99102 AP001582.1-201ENST00000525856 295 ntBASIC10.77□□□□□ -0.69
MUC4Q99102 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC10.77□□□□□ -0.69
MUC4Q99102 AL359711.2-201ENST00000563105 872 ntBASIC10.77□□□□□ -0.69
MUC4Q99102 BNIP3P29-201ENST00000598302 571 ntBASIC10.77□□□□□ -0.69
MUC4Q99102 AC011447.5-201ENST00000616168 564 ntBASIC10.77□□□□□ -0.69
MUC4Q99102 BX539320.1-201ENST00000623759 877 ntBASIC10.77□□□□□ -0.69
MUC4Q99102 AL033527.5-201ENST00000641382 801 ntBASIC10.77□□□□□ -0.69
MUC4Q99102 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
MUC4Q99102 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
MUC4Q99102 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
MUC4Q99102 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
MUC4Q99102 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
MUC4Q99102 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
MUC4Q99102 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
MUC4Q99102 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
MUC4Q99102 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
MUC4Q99102 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
MUC4Q99102 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
MUC4Q99102 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
MUC4Q99102 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC10.77□□□□□ -0.69
MUC4Q99102 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
MUC4Q99102 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
MUC4Q99102 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
MUC4Q99102 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
MUC4Q99102 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
MUC4Q99102 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC10.76□□□□□ -0.69
MUC4Q99102 AC105206.1-202ENST00000314927 2368 ntBASIC10.76□□□□□ -0.69
MUC4Q99102 ANKRD19P-201ENST00000338192 862 ntBASIC10.76□□□□□ -0.69
MUC4Q99102 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC10.76□□□□□ -0.69
MUC4Q99102 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
MUC4Q99102 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
MUC4Q99102 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC10.76□□□□□ -0.69
MUC4Q99102 AC012441.1-201ENST00000446669 685 ntBASIC10.76□□□□□ -0.69
MUC4Q99102 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC10.76□□□□□ -0.69
MUC4Q99102 MYADML-201ENST00000474610 2147 ntBASIC10.76□□□□□ -0.69
MUC4Q99102 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC10.76□□□□□ -0.69
MUC4Q99102 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC10.76□□□□□ -0.69
MUC4Q99102 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
MUC4Q99102 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC10.76□□□□□ -0.69
MUC4Q99102 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC10.76□□□□□ -0.69
MUC4Q99102 LRRC59-203ENST00000576448 1531 ntBASIC10.76□□□□□ -0.69
MUC4Q99102 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC10.76□□□□□ -0.69
MUC4Q99102 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC10.76□□□□□ -0.69
MUC4Q99102 AL603764.1-201ENST00000636452 321 ntBASIC10.76□□□□□ -0.69
MUC4Q99102 AC068587.6-202ENST00000641839 5619 ntBASIC10.76□□□□□ -0.69
MUC4Q99102 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC10.76□□□□□ -0.69
MUC4Q99102 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
MUC4Q99102 AC111170.3-201ENST00000624282 2464 ntBASIC10.76□□□□□ -0.69
MUC4Q99102 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 HSPA8P5-201ENST00000456928 2069 ntBASIC10.76□□□□□ -0.69
MUC4Q99102 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC10.76□□□□□ -0.69
MUC4Q99102 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC10.76□□□□□ -0.69
MUC4Q99102 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
MUC4Q99102 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
MUC4Q99102 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC10.76□□□□□ -0.69
MUC4Q99102 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 AC011840.2-201ENST00000563063 1520 ntBASIC10.76□□□□□ -0.69
MUC4Q99102 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
MUC4Q99102 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC10.76□□□□□ -0.69
MUC4Q99102 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 FOS-202ENST00000535987 1402 ntTSL 2 BASIC10.76□□□□□ -0.69
MUC4Q99102 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC10.76□□□□□ -0.69
MUC4Q99102 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
MUC4Q99102 APOC3-202ENST00000375345 604 ntTSL 5 BASIC10.76□□□□□ -0.69
MUC4Q99102 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC10.76□□□□□ -0.69
MUC4Q99102 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC10.76□□□□□ -0.69
MUC4Q99102 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC10.76□□□□□ -0.69
MUC4Q99102 TMEM14DP-201ENST00000422205 345 ntBASIC10.76□□□□□ -0.69
MUC4Q99102 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC10.76□□□□□ -0.69
MUC4Q99102 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC10.76□□□□□ -0.69
MUC4Q99102 AC104989.1-201ENST00000519711 778 ntBASIC10.76□□□□□ -0.69
MUC4Q99102 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
MUC4Q99102 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC10.76□□□□□ -0.69
MUC4Q99102 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms