Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 AC092135.3-201ENST00000624151 1846 ntBASIC4.24□□□□□ -1.73
HMCN1Q96RW7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 BAAT-202ENST00000395051 2252 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 NME1-201ENST00000013034 796 ntTSL 3 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 RPL15-202ENST00000354811 820 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 AC004884.1-201ENST00000393647 319 ntBASIC4.24□□□□□ -1.73
HMCN1Q96RW7 RPL36P20-201ENST00000423702 319 ntBASIC4.24□□□□□ -1.73
HMCN1Q96RW7 CXXC1P1-202ENST00000489409 1212 ntBASIC4.24□□□□□ -1.73
HMCN1Q96RW7 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 USP8-219ENST00000625664 1568 ntTSL 5 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 HLA-W-207ENST00000439514 771 ntBASIC4.24□□□□□ -1.73
HMCN1Q96RW7 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 C9orf147-203ENST00000460965 446 ntTSL 3 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 WASH6P-207ENST00000476066 720 ntTSL 5 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 MYCT1-202ENST00000529453 724 ntTSL 3 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 TTN-AS1-236ENST00000590040 855 ntTSL 5 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 AL137785.1-201ENST00000637466 490 ntTSL 5 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 AC091885.2-201ENST00000510391 1791 ntTSL 3 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 CCDC175-202ENST00000537690 2616 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 AC139712.1-201ENST00000378256 1875 ntBASIC4.24□□□□□ -1.73
HMCN1Q96RW7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 VSTM1-202ENST00000366170 654 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 C22orf15-203ENST00000402217 829 ntAPPRIS P3 TSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 PPP1R7-206ENST00000406106 965 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 EXOC7-206ENST00000406660 718 ntTSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 PDCD4-AS1-201ENST00000420367 778 ntTSL 2 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 TUSC8-201ENST00000432701 978 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC4.24□□□□□ -1.73
HMCN1Q96RW7 AC022483.2-201ENST00000461464 555 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms