Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 IGLL3P-201ENST00000412472 434 ntBASIC13.86□□□□□ -0.19
NR1H4Q96RI1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 AC003958.1-201ENST00000435883 421 ntBASIC13.86□□□□□ -0.19
NR1H4Q96RI1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 AC010507.1-201ENST00000633895 436 ntBASIC13.86□□□□□ -0.19
NR1H4Q96RI1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NR1H4Q96RI1 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 AC026271.4-201ENST00000578214 1833 ntBASIC13.85□□□□□ -0.19
NR1H4Q96RI1 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 AC008620.2-201ENST00000510294 1569 ntBASIC13.85□□□□□ -0.19
NR1H4Q96RI1 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 AZGP1P1-201ENST00000411909 902 ntBASIC13.85□□□□□ -0.19
NR1H4Q96RI1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 HCG4B-203ENST00000450128 991 ntBASIC13.85□□□□□ -0.19
NR1H4Q96RI1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 AC015910.1-201ENST00000579400 975 ntBASIC13.85□□□□□ -0.19
NR1H4Q96RI1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 AC007064.4-201ENST00000637740 555 ntBASIC13.85□□□□□ -0.19
NR1H4Q96RI1 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 AC018445.4-201ENST00000624066 2291 ntBASIC13.85□□□□□ -0.19
NR1H4Q96RI1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 SUPT20HL1-201ENST00000436466 2618 ntBASIC13.85□□□□□ -0.19
NR1H4Q96RI1 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NR1H4Q96RI1 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 AC115284.2-201ENST00000624646 2054 ntBASIC13.84□□□□□ -0.19
NR1H4Q96RI1 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms