Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL21A1Q96P44 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL21A1Q96P44 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL21A1Q96P44 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL21A1Q96P44 AC092933.1-201ENST00000393644 945 ntBASIC13.94□□□□□ -0.18
COL21A1Q96P44 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL21A1Q96P44 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL21A1Q96P44 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL21A1Q96P44 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL21A1Q96P44 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 AC106886.1-201ENST00000568660 600 ntBASIC13.94□□□□□ -0.18
COL21A1Q96P44 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL21A1Q96P44 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 AL162274.1-201ENST00000617191 1098 ntBASIC13.94□□□□□ -0.18
COL21A1Q96P44 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL21A1Q96P44 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL21A1Q96P44 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL21A1Q96P44 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL21A1Q96P44 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL21A1Q96P44 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL21A1Q96P44 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL21A1Q96P44 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
COL21A1Q96P44 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.93□□□□□ -0.18
COL21A1Q96P44 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.93□□□□□ -0.18
COL21A1Q96P44 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.93□□□□□ -0.18
COL21A1Q96P44 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
COL21A1Q96P44 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
COL21A1Q96P44 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
COL21A1Q96P44 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.93□□□□□ -0.18
COL21A1Q96P44 AC016694.1-201ENST00000434179 700 ntBASIC13.93□□□□□ -0.18
COL21A1Q96P44 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
COL21A1Q96P44 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.93□□□□□ -0.18
COL21A1Q96P44 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
COL21A1Q96P44 AC026434.2-201ENST00000506094 1078 ntBASIC13.93□□□□□ -0.18
COL21A1Q96P44 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.93□□□□□ -0.18
COL21A1Q96P44 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.93□□□□□ -0.18
COL21A1Q96P44 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.93□□□□□ -0.18
COL21A1Q96P44 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
COL21A1Q96P44 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.93□□□□□ -0.18
COL21A1Q96P44 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL21A1Q96P44 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 AC089987.1-201ENST00000551654 2209 ntBASIC13.92□□□□□ -0.18
COL21A1Q96P44 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms