Protein–RNA interactions for Protein: Q96MK2

RIPOR3, RIPOR family member 3, humanhuman

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPOR3Q96MK2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 KRT8P28-201ENST00000433288 1390 ntBASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 AC073869.2-201ENST00000417338 1026 ntBASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 ERP29P1-201ENST00000442902 706 ntBASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 AL118516.1-201ENST00000564152 670 ntBASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 HKR1-225ENST00000592168 566 ntTSL 4 BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 AC006158.1-201ENST00000610661 249 ntBASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 AC018695.6-201ENST00000614011 534 ntBASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 AC073592.2-201ENST00000623062 780 ntBASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 AC087481.3-201ENST00000602886 1894 ntBASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 TEKT4P2-202ENST00000559466 1312 ntBASIC15.16■□□□□ 0.02
RIPOR3Q96MK2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RIPOR3Q96MK2 AC067930.6-201ENST00000623257 4947 ntBASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 RN7SKP109-201ENST00000410592 316 ntBASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 DDX39AP1-201ENST00000445147 1181 ntBASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 RPL18AP8-201ENST00000486071 528 ntBASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 LINC00634-202ENST00000505157 222 ntBASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 AC026410.1-201ENST00000507366 1101 ntBASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 AC140113.1-201ENST00000603467 169 ntBASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 AC092135.3-201ENST00000624151 1846 ntBASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RIPOR3Q96MK2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms