Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 MIR769-201ENST00000390225 118 ntBASIC13.36□□□□□ -0.27
LRRC46Q96FV0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 EIF4HP1-201ENST00000453115 687 ntBASIC13.36□□□□□ -0.27
LRRC46Q96FV0 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 RN7SL713P-201ENST00000582127 302 ntBASIC13.36□□□□□ -0.27
LRRC46Q96FV0 PPY2P-201ENST00000582808 702 ntBASIC13.36□□□□□ -0.27
LRRC46Q96FV0 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 AC106872.11-201ENST00000605838 421 ntBASIC13.36□□□□□ -0.27
LRRC46Q96FV0 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 AC007663.3-201ENST00000609632 465 ntBASIC13.36□□□□□ -0.27
LRRC46Q96FV0 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.36□□□□□ -0.27
LRRC46Q96FV0 AC138649.2-201ENST00000615886 705 ntBASIC13.36□□□□□ -0.27
LRRC46Q96FV0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC46Q96FV0 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 FTLP10-202ENST00000505798 471 ntBASIC13.35□□□□□ -0.27
LRRC46Q96FV0 NDUFV2P1-201ENST00000596415 907 ntBASIC13.35□□□□□ -0.27
LRRC46Q96FV0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 AL023803.2-201ENST00000620080 638 ntBASIC13.35□□□□□ -0.27
LRRC46Q96FV0 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 AC013726.1-201ENST00000563747 2285 ntBASIC13.35□□□□□ -0.27
LRRC46Q96FV0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC46Q96FV0 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 AC020658.6-201ENST00000623564 1870 ntBASIC13.34□□□□□ -0.27
LRRC46Q96FV0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms