Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 AC004890.2-204ENST00000481968 304 ntBASIC12.86□□□□□ -0.35
CPNE2Q96FN4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 AC008738.7-201ENST00000609744 511 ntBASIC12.86□□□□□ -0.35
CPNE2Q96FN4 MIR6074-201ENST00000612054 107 ntBASIC12.86□□□□□ -0.35
CPNE2Q96FN4 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.86□□□□□ -0.35
CPNE2Q96FN4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 SALL4P5-201ENST00000419001 1760 ntBASIC12.85□□□□□ -0.35
CPNE2Q96FN4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 KRT18P25-201ENST00000508931 1278 ntBASIC12.85□□□□□ -0.35
CPNE2Q96FN4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CPNE2Q96FN4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms