Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SPTSSAQ969W0 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.89□□□□□ -0.35
SPTSSAQ969W0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SPTSSAQ969W0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SPTSSAQ969W0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.89□□□□□ -0.35
SPTSSAQ969W0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SPTSSAQ969W0 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SPTSSAQ969W0 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SPTSSAQ969W0 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SPTSSAQ969W0 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SPTSSAQ969W0 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SPTSSAQ969W0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SPTSSAQ969W0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SPTSSAQ969W0 INE2-201ENST00000630399 1874 ntBASIC12.89□□□□□ -0.35
SPTSSAQ969W0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 AL354989.2-201ENST00000435838 1540 ntBASIC12.88□□□□□ -0.35
SPTSSAQ969W0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 AC215219.1-201ENST00000400706 1817 ntBASIC12.88□□□□□ -0.35
SPTSSAQ969W0 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 AC092933.1-201ENST00000393644 945 ntBASIC12.88□□□□□ -0.35
SPTSSAQ969W0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 AL596325.1-201ENST00000563991 1082 ntBASIC12.88□□□□□ -0.35
SPTSSAQ969W0 GNRHR2-203ENST00000581100 1187 ntBASIC12.88□□□□□ -0.35
SPTSSAQ969W0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 BTNL10-201ENST00000595971 695 ntBASIC12.88□□□□□ -0.35
SPTSSAQ969W0 AC008735.3-201ENST00000596646 500 ntBASIC12.88□□□□□ -0.35
SPTSSAQ969W0 OR10B1P-201ENST00000601666 907 ntBASIC12.88□□□□□ -0.35
SPTSSAQ969W0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.88□□□□□ -0.35
SPTSSAQ969W0 AP001002.3-201ENST00000623482 206 ntBASIC12.88□□□□□ -0.35
SPTSSAQ969W0 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SPTSSAQ969W0 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 KHSRPP1-201ENST00000427983 1768 ntBASIC12.87□□□□□ -0.35
SPTSSAQ969W0 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms