Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 YY1P2-201ENST00000438766 948 ntBASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 OR4C14P-201ENST00000440929 923 ntBASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 RPS5-205ENST00000598495 800 ntTSL 3 BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 AC139100.2-201ENST00000616901 662 ntBASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARHGEF40Q8TER5 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 DUT-208ENST00000559540 1441 ntTSL 2 BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 RN7SL69P-201ENST00000468423 272 ntBASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 CD44-224ENST00000526669 870 ntTSL 5 BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 MST1L-204ENST00000545160 559 ntTSL 4 BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 BOLA3P2-201ENST00000586496 323 ntBASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 MIR8071-1-201ENST00000616769 65 ntBASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 MIR8071-2-201ENST00000616772 65 ntBASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 MEP1AP1-201ENST00000636082 1097 ntBASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ARHGEF40Q8TER5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 RNA5SP288-201ENST00000516075 93 ntBASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 AC010202.1-201ENST00000551181 405 ntBASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 RN7SL478P-201ENST00000584358 298 ntBASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 AC026120.2-201ENST00000617239 309 ntBASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ARHGEF40Q8TER5 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ARHGEF40Q8TER5 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ARHGEF40Q8TER5 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ARHGEF40Q8TER5 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ARHGEF40Q8TER5 RNASEH2CP1-201ENST00000454281 502 ntBASIC20.84■□□□□ 0.93
ARHGEF40Q8TER5 AC079250.1-201ENST00000456046 531 ntBASIC20.84■□□□□ 0.93
ARHGEF40Q8TER5 CETN3-205ENST00000522842 664 ntTSL 2 BASIC20.84■□□□□ 0.93
ARHGEF40Q8TER5 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARHGEF40Q8TER5 AP006248.1-201ENST00000610471 67 ntBASIC20.84■□□□□ 0.93
ARHGEF40Q8TER5 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms