Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 AC125807.2-201ENST00000513358 3514 ntBASIC9.57□□□□□ -0.88
SMIM11BQ8TCY0 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SMIM11BQ8TCY0 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SMIM11BQ8TCY0 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SMIM11BQ8TCY0 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SMIM11BQ8TCY0 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SMIM11BQ8TCY0 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SMIM11BQ8TCY0 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SMIM11BQ8TCY0 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SMIM11BQ8TCY0 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SMIM11BQ8TCY0 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 KRT8P35-201ENST00000483942 1338 ntBASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 KRT8P14-201ENST00000414254 1442 ntBASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 AL121723.1-201ENST00000445194 1519 ntBASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 SPDYE17-201ENST00000412399 783 ntBASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 AL671277.1-201ENST00000429656 993 ntBASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 KRT18P67-201ENST00000432816 1264 ntBASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 PCDHA6-201ENST00000378126 3267 ntBASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 AGAP12P-201ENST00000585227 2359 ntBASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SMIM11BQ8TCY0 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
SMIM11BQ8TCY0 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SMIM11BQ8TCY0 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SMIM11BQ8TCY0 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
SMIM11BQ8TCY0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC9.55□□□□□ -0.88
SMIM11BQ8TCY0 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SMIM11BQ8TCY0 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SMIM11BQ8TCY0 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SMIM11BQ8TCY0 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC9.55□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms