Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.97■□□□□ 0.15
VPS52Q8N1B4 AC079336.7-201ENST00000623428 1078 ntBASIC15.97■□□□□ 0.15
VPS52Q8N1B4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS52Q8N1B4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
VPS52Q8N1B4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS52Q8N1B4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS52Q8N1B4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS52Q8N1B4 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
VPS52Q8N1B4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
VPS52Q8N1B4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VPS52Q8N1B4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VPS52Q8N1B4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS52Q8N1B4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
VPS52Q8N1B4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.97■□□□□ 0.15
VPS52Q8N1B4 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS52Q8N1B4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS52Q8N1B4 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS52Q8N1B4 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 AL157791.1-201ENST00000553667 1699 ntBASIC15.96■□□□□ 0.15
VPS52Q8N1B4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 AC010141.1-201ENST00000411585 623 ntBASIC15.96■□□□□ 0.15
VPS52Q8N1B4 AC007274.2-201ENST00000421675 662 ntBASIC15.96■□□□□ 0.15
VPS52Q8N1B4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 PUDPP3-201ENST00000445368 636 ntBASIC15.96■□□□□ 0.15
VPS52Q8N1B4 RPL18P13-201ENST00000478088 569 ntBASIC15.96■□□□□ 0.15
VPS52Q8N1B4 AC125604.1-201ENST00000496255 707 ntBASIC15.96■□□□□ 0.15
VPS52Q8N1B4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 AL133499.1-201ENST00000596207 608 ntBASIC15.96■□□□□ 0.15
VPS52Q8N1B4 AL353726.2-201ENST00000623259 884 ntBASIC15.96■□□□□ 0.15
VPS52Q8N1B4 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 AC104581.4-201ENST00000623126 3052 ntBASIC15.96■□□□□ 0.15
VPS52Q8N1B4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS52Q8N1B4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
VPS52Q8N1B4 AC012508.2-201ENST00000567613 1472 ntBASIC15.96■□□□□ 0.14
VPS52Q8N1B4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.96■□□□□ 0.14
VPS52Q8N1B4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
VPS52Q8N1B4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.96■□□□□ 0.14
VPS52Q8N1B4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
VPS52Q8N1B4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
VPS52Q8N1B4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 FTLP1-201ENST00000449155 526 ntBASIC15.95■□□□□ 0.14
VPS52Q8N1B4 EEF1DP6-201ENST00000449232 372 ntBASIC15.95■□□□□ 0.14
VPS52Q8N1B4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 RPS2P36-201ENST00000456516 831 ntBASIC15.95■□□□□ 0.14
VPS52Q8N1B4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VPS52Q8N1B4 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms