Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB11FIP4Q86YS3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB11FIP4Q86YS3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB11FIP4Q86YS3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB11FIP4Q86YS3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB11FIP4Q86YS3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB11FIP4Q86YS3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 KLF2P1-201ENST00000447438 1042 ntBASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 SHC1P1-201ENST00000425230 1745 ntBASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 KRT8P28-201ENST00000433288 1390 ntBASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 AL590440.2-201ENST00000641973 1595 ntBASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 KHSRPP1-201ENST00000427983 1768 ntBASIC17.23■□□□□ 0.35
RAB11FIP4Q86YS3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 FAM21FP-201ENST00000426241 1131 ntBASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 AL583810.1-201ENST00000553344 1045 ntBASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 AC005730.2-201ENST00000564549 1184 ntBASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 AL033527.4-201ENST00000641026 673 ntBASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB11FIP4Q86YS3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB11FIP4Q86YS3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB11FIP4Q86YS3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB11FIP4Q86YS3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB11FIP4Q86YS3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RAB11FIP4Q86YS3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
RAB11FIP4Q86YS3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB11FIP4Q86YS3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB11FIP4Q86YS3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB11FIP4Q86YS3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RAB11FIP4Q86YS3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RAB11FIP4Q86YS3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB11FIP4Q86YS3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms