Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 AKR7A2P1-201ENST00000460134 915 ntBASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 SCARNA21-201ENST00000517026 139 ntBASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 AC133540.1-201ENST00000620845 1019 ntBASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LRRTM4Q86VH4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 FAM90A7P-201ENST00000382628 1395 ntBASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 FAM90A23P-201ENST00000400136 1395 ntBASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 MARK2P5-201ENST00000507649 634 ntBASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 SNORD3B-2-202ENST00000571722 791 ntBASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 AC136759.1-202ENST00000530858 2194 ntBASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM4Q86VH4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms