Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 AL009178.2-201ENST00000597278 2719 ntBASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 AC023908.3-201ENST00000564211 3047 ntBASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 AL033527.4-201ENST00000641026 673 ntBASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 AC131212.3-201ENST00000624087 4219 ntBASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.6□□□□□ -0.23
NUP54Q7Z3B4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 BX640514.1-201ENST00000583223 1918 ntBASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 BRWD1P1-201ENST00000401091 371 ntBASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 GOLGA2P4-201ENST00000441462 777 ntBASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 RPSAP36-202ENST00000494591 1261 ntBASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 FAM86HP-204ENST00000513466 959 ntBASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 DUX4L46-201ENST00000566845 751 ntBASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.59□□□□□ -0.23
NUP54Q7Z3B4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms