Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 AF228730.6-201ENST00000641497 218 ntBASIC12.93□□□□□ -0.34
C11orf88Q6PI97 AC084121.3-201ENST00000641716 218 ntBASIC12.93□□□□□ -0.34
C11orf88Q6PI97 AC105233.6-201ENST00000642093 218 ntBASIC12.93□□□□□ -0.34
C11orf88Q6PI97 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 AC100757.3-201ENST00000622361 1406 ntBASIC12.93□□□□□ -0.34
C11orf88Q6PI97 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 AL139385.1-201ENST00000611744 3272 ntBASIC12.92□□□□□ -0.34
C11orf88Q6PI97 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 AC004890.2-204ENST00000481968 304 ntBASIC12.92□□□□□ -0.34
C11orf88Q6PI97 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 AL590560.3-201ENST00000623350 461 ntBASIC12.92□□□□□ -0.34
C11orf88Q6PI97 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.92□□□□□ -0.34
C11orf88Q6PI97 AC055811.4-201ENST00000624039 1754 ntBASIC12.92□□□□□ -0.34
C11orf88Q6PI97 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 AP000845.1-201ENST00000581677 2131 ntBASIC12.91□□□□□ -0.34
C11orf88Q6PI97 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 AC084364.1-201ENST00000551967 1556 ntBASIC12.91□□□□□ -0.34
C11orf88Q6PI97 AC022144.1-201ENST00000602255 1580 ntBASIC12.91□□□□□ -0.34
C11orf88Q6PI97 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.91□□□□□ -0.34
C11orf88Q6PI97 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms