Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC15.05■□□□□ -0
CASC4Q6P4E1 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CASC4Q6P4E1 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.04■□□□□ -0
CASC4Q6P4E1 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CASC4Q6P4E1 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.04■□□□□ -0
CASC4Q6P4E1 MYADML-201ENST00000474610 2147 ntBASIC15.04■□□□□ -0
CASC4Q6P4E1 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.04■□□□□ -0
CASC4Q6P4E1 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.04■□□□□ -0
CASC4Q6P4E1 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
CASC4Q6P4E1 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CASC4Q6P4E1 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CASC4Q6P4E1 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CASC4Q6P4E1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CASC4Q6P4E1 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.04■□□□□ -0
CASC4Q6P4E1 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
CASC4Q6P4E1 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.04■□□□□ -0
CASC4Q6P4E1 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CASC4Q6P4E1 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.04■□□□□ -0
CASC4Q6P4E1 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CASC4Q6P4E1 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.04■□□□□ -0
CASC4Q6P4E1 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.04■□□□□ -0
CASC4Q6P4E1 AC009486.1-201ENST00000569860 813 ntBASIC15.04■□□□□ -0
CASC4Q6P4E1 AC140912.1-201ENST00000577171 1054 ntBASIC15.04■□□□□ -0
CASC4Q6P4E1 AC138761.1-201ENST00000584393 385 ntBASIC15.04■□□□□ -0
CASC4Q6P4E1 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CASC4Q6P4E1 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.04■□□□□ -0
CASC4Q6P4E1 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CASC4Q6P4E1 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CASC4Q6P4E1 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.04■□□□□ -0
CASC4Q6P4E1 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 MST1P2-201ENST00000457982 2291 ntBASIC15.04■□□□□ -0
CASC4Q6P4E1 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CASC4Q6P4E1 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CASC4Q6P4E1 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CASC4Q6P4E1 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CASC4Q6P4E1 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.04■□□□□ -0
CASC4Q6P4E1 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.03■□□□□ -0
CASC4Q6P4E1 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CASC4Q6P4E1 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.03■□□□□ -0
CASC4Q6P4E1 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.03■□□□□ -0
CASC4Q6P4E1 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.03■□□□□ -0
CASC4Q6P4E1 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.03■□□□□ -0
CASC4Q6P4E1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.03■□□□□ -0
CASC4Q6P4E1 AC236430.1-201ENST00000402231 743 ntBASIC15.03■□□□□ -0
CASC4Q6P4E1 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.03■□□□□ -0
CASC4Q6P4E1 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.03■□□□□ -0
CASC4Q6P4E1 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.03■□□□□ -0
CASC4Q6P4E1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CASC4Q6P4E1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.03■□□□□ -0
CASC4Q6P4E1 WASH4P-201ENST00000564273 1246 ntBASIC15.03■□□□□ -0
CASC4Q6P4E1 RN7SL204P-201ENST00000582831 262 ntBASIC15.03■□□□□ -0
CASC4Q6P4E1 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.03■□□□□ -0
CASC4Q6P4E1 AL033527.5-201ENST00000641382 801 ntBASIC15.03■□□□□ -0
CASC4Q6P4E1 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC15.03■□□□□ -0
CASC4Q6P4E1 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.03■□□□□ -0
CASC4Q6P4E1 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms