Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 AC011840.2-201ENST00000563063 1520 ntBASIC11.13□□□□□ -0.63
MRPL54Q6P161 AP000437.1-201ENST00000624057 2085 ntBASIC11.13□□□□□ -0.63
MRPL54Q6P161 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 NME1-209ENST00000511355 1645 ntTSL 5 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 AC025580.3-201ENST00000617932 1424 ntBASIC11.12□□□□□ -0.63
MRPL54Q6P161 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 AC211429.1-201ENST00000415277 523 ntBASIC11.12□□□□□ -0.63
MRPL54Q6P161 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 ISCU-203ENST00000431221 799 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 HCG4B-203ENST00000450128 991 ntBASIC11.12□□□□□ -0.63
MRPL54Q6P161 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 AC091304.2-201ENST00000564639 760 ntBASIC11.12□□□□□ -0.63
MRPL54Q6P161 RARRES2P8-201ENST00000566335 367 ntBASIC11.12□□□□□ -0.63
MRPL54Q6P161 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 AP000550.4-202ENST00000639755 178 ntBASIC11.12□□□□□ -0.63
MRPL54Q6P161 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 AC011498.7-201ENST00000624986 2027 ntBASIC11.12□□□□□ -0.63
MRPL54Q6P161 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 AP001972.5-201ENST00000624624 2338 ntBASIC11.12□□□□□ -0.63
MRPL54Q6P161 AC215219.1-201ENST00000400706 1817 ntBASIC11.12□□□□□ -0.63
MRPL54Q6P161 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC11.12□□□□□ -0.63
MRPL54Q6P161 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MRPL54Q6P161 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms