Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 KHSRPP1-201ENST00000427983 1768 ntBASIC15.55■□□□□ 0.08
VARS2Q5ST30 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 AC015688.4-201ENST00000580780 1647 ntBASIC15.55■□□□□ 0.08
VARS2Q5ST30 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 AL355334.1-201ENST00000417713 215 ntBASIC15.55■□□□□ 0.08
VARS2Q5ST30 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 EEF1DP6-201ENST00000449232 372 ntBASIC15.55■□□□□ 0.08
VARS2Q5ST30 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 AC253576.1-201ENST00000511645 1156 ntBASIC15.55■□□□□ 0.08
VARS2Q5ST30 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.55■□□□□ 0.08
VARS2Q5ST30 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 AC009268.1-201ENST00000561352 1203 ntBASIC15.55■□□□□ 0.08
VARS2Q5ST30 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 AC018529.2-202ENST00000611482 3087 ntBASIC15.55■□□□□ 0.08
VARS2Q5ST30 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARS2Q5ST30 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VARS2Q5ST30 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARS2Q5ST30 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARS2Q5ST30 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARS2Q5ST30 AC067930.6-201ENST00000623257 4947 ntBASIC15.54■□□□□ 0.08
VARS2Q5ST30 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VARS2Q5ST30 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARS2Q5ST30 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARS2Q5ST30 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARS2Q5ST30 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARS2Q5ST30 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARS2Q5ST30 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARS2Q5ST30 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VARS2Q5ST30 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms