Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ANKRD55Q3KP44 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 DMBT1P1-203ENST00000636837 4628 ntBASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 KRT8P35-201ENST00000483942 1338 ntBASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 AC093520.2-201ENST00000561830 333 ntBASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 AC004899.2-201ENST00000622993 3860 ntBASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
ANKRD55Q3KP44 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 AL136172.1-201ENST00000598590 1394 ntBASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 AL353779.1-201ENST00000434793 351 ntBASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 PCDHB18P-202ENST00000526308 3197 ntBASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms