Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP1Q04837 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SSBP1Q04837 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP1Q04837 AC023274.1-201ENST00000418278 595 ntBASIC12.43□□□□□ -0.42
SSBP1Q04837 HTR5BP-201ENST00000430851 1154 ntBASIC12.43□□□□□ -0.42
SSBP1Q04837 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.43□□□□□ -0.42
SSBP1Q04837 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
SSBP1Q04837 ZNF890P-202ENST00000530367 1156 ntBASIC12.43□□□□□ -0.42
SSBP1Q04837 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP1Q04837 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.43□□□□□ -0.42
SSBP1Q04837 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC12.43□□□□□ -0.42
SSBP1Q04837 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.43□□□□□ -0.42
SSBP1Q04837 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.43□□□□□ -0.42
SSBP1Q04837 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SSBP1Q04837 BX539320.1-201ENST00000623759 877 ntBASIC12.43□□□□□ -0.42
SSBP1Q04837 AL158212.4-201ENST00000624062 1286 ntBASIC12.43□□□□□ -0.42
SSBP1Q04837 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.43□□□□□ -0.42
SSBP1Q04837 AL513210.1-201ENST00000629608 234 ntBASIC12.43□□□□□ -0.42
SSBP1Q04837 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.43□□□□□ -0.42
SSBP1Q04837 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.43□□□□□ -0.42
SSBP1Q04837 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SSBP1Q04837 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP1Q04837 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP1Q04837 AC092053.3-201ENST00000641308 4975 ntBASIC12.43□□□□□ -0.42
SSBP1Q04837 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
SSBP1Q04837 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP1Q04837 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP1Q04837 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
SSBP1Q04837 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SSBP1Q04837 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.42□□□□□ -0.42
SSBP1Q04837 AC019294.4-201ENST00000561777 2905 ntBASIC12.42□□□□□ -0.42
SSBP1Q04837 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SSBP1Q04837 AL138725.1-201ENST00000407347 1314 ntBASIC12.42□□□□□ -0.42
SSBP1Q04837 IL9RP2-201ENST00000423948 1312 ntBASIC12.42□□□□□ -0.42
SSBP1Q04837 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SSBP1Q04837 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SSBP1Q04837 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SSBP1Q04837 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
SSBP1Q04837 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.42□□□□□ -0.42
SSBP1Q04837 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.42□□□□□ -0.42
SSBP1Q04837 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SSBP1Q04837 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.42□□□□□ -0.42
SSBP1Q04837 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SSBP1Q04837 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SSBP1Q04837 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.42□□□□□ -0.42
SSBP1Q04837 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SSBP1Q04837 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 GIMAP3P-201ENST00000495150 836 ntBASIC12.42□□□□□ -0.42
SSBP1Q04837 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.42□□□□□ -0.42
SSBP1Q04837 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.42□□□□□ -0.42
SSBP1Q04837 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.42□□□□□ -0.42
SSBP1Q04837 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.42□□□□□ -0.42
SSBP1Q04837 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.42□□□□□ -0.42
SSBP1Q04837 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.42□□□□□ -0.42
SSBP1Q04837 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.42□□□□□ -0.42
SSBP1Q04837 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.42□□□□□ -0.42
SSBP1Q04837 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.42□□□□□ -0.42
SSBP1Q04837 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.42□□□□□ -0.42
SSBP1Q04837 AP001059.3-201ENST00000619053 235 ntBASIC12.42□□□□□ -0.42
SSBP1Q04837 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
SSBP1Q04837 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SSBP1Q04837 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SSBP1Q04837 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP1Q04837 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms