Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 AP001889.1-201ENST00000525414 633 ntBASIC14.17□□□□□ -0.14
HMGCS1Q01581 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCS1Q01581 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HMGCS1Q01581 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCS1Q01581 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCS1Q01581 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCS1Q01581 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCS1Q01581 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCS1Q01581 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCS1Q01581 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCS1Q01581 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCS1Q01581 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCS1Q01581 TPM3P8-201ENST00000330554 643 ntBASIC14.16□□□□□ -0.14
HMGCS1Q01581 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCS1Q01581 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCS1Q01581 RN7SKP175-201ENST00000408472 289 ntBASIC14.16□□□□□ -0.14
HMGCS1Q01581 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCS1Q01581 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCS1Q01581 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 GNRHR2-203ENST00000581100 1187 ntBASIC14.16□□□□□ -0.14
HMGCS1Q01581 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 BX088702.1-201ENST00000610784 235 ntBASIC14.16□□□□□ -0.14
HMGCS1Q01581 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCS1Q01581 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCS1Q01581 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCS1Q01581 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCS1Q01581 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGCS1Q01581 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms