Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.52□□□□□ -0.25
CLDN20P56880 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.52□□□□□ -0.25
CLDN20P56880 MESTP3-201ENST00000503460 968 ntBASIC13.52□□□□□ -0.25
CLDN20P56880 AL391280.1-201ENST00000506969 1062 ntBASIC13.52□□□□□ -0.25
CLDN20P56880 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.52□□□□□ -0.25
CLDN20P56880 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CLDN20P56880 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.52□□□□□ -0.25
CLDN20P56880 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CLDN20P56880 AP003171.2-201ENST00000528208 925 ntBASIC13.52□□□□□ -0.25
CLDN20P56880 AL583810.1-201ENST00000553344 1045 ntBASIC13.52□□□□□ -0.25
CLDN20P56880 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.52□□□□□ -0.25
CLDN20P56880 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.52□□□□□ -0.25
CLDN20P56880 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.52□□□□□ -0.25
CLDN20P56880 AC009542.2-202ENST00000619004 1067 ntBASIC13.52□□□□□ -0.25
CLDN20P56880 AL033527.4-201ENST00000641026 673 ntBASIC13.52□□□□□ -0.25
CLDN20P56880 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CLDN20P56880 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
CLDN20P56880 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN20P56880 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN20P56880 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN20P56880 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.52□□□□□ -0.25
CLDN20P56880 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN20P56880 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN20P56880 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.52□□□□□ -0.25
CLDN20P56880 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CLDN20P56880 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN20P56880 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.52□□□□□ -0.25
CLDN20P56880 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CLDN20P56880 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN20P56880 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN20P56880 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
CLDN20P56880 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
CLDN20P56880 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN20P56880 AC067750.1-201ENST00000608826 6545 ntBASIC13.51□□□□□ -0.25
CLDN20P56880 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CLDN20P56880 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDN20P56880 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CLDN20P56880 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CLDN20P56880 AP001267.2-201ENST00000532619 2086 ntBASIC13.51□□□□□ -0.25
CLDN20P56880 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 INE2-201ENST00000630399 1874 ntBASIC13.51□□□□□ -0.25
CLDN20P56880 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDN20P56880 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN20P56880 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CLDN20P56880 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CLDN20P56880 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
CLDN20P56880 FKBP4P6-201ENST00000457486 1332 ntBASIC13.51□□□□□ -0.25
CLDN20P56880 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN20P56880 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 FTLP10-202ENST00000505798 471 ntBASIC13.51□□□□□ -0.25
CLDN20P56880 COX5BP1-201ENST00000507622 393 ntBASIC13.51□□□□□ -0.25
CLDN20P56880 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.51□□□□□ -0.25
CLDN20P56880 RNA5SP412-201ENST00000516234 123 ntBASIC13.51□□□□□ -0.25
CLDN20P56880 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
CLDN20P56880 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDN20P56880 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
CLDN20P56880 AC106820.3-201ENST00000561653 397 ntBASIC13.51□□□□□ -0.25
CLDN20P56880 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN20P56880 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN20P56880 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CLDN20P56880 AC010328.2-201ENST00000597698 1111 ntBASIC13.51□□□□□ -0.25
CLDN20P56880 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDN20P56880 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CLDN20P56880 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CLDN20P56880 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDN20P56880 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
CLDN20P56880 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CLDN20P56880 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
CLDN20P56880 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN20P56880 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN20P56880 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN20P56880 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN20P56880 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CLDN20P56880 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CLDN20P56880 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDN20P56880 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms