Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PER3P56645 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
PER3P56645 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PER3P56645 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
PER3P56645 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PER3P56645 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PER3P56645 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
PER3P56645 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.7□□□□□ -0.22
PER3P56645 LRRC59-203ENST00000576448 1531 ntBASIC13.7□□□□□ -0.22
PER3P56645 FGD5P1-202ENST00000614866 2498 ntBASIC13.7□□□□□ -0.22
PER3P56645 AC027601.5-201ENST00000624065 2482 ntBASIC13.7□□□□□ -0.22
PER3P56645 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
PER3P56645 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
PER3P56645 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.7□□□□□ -0.22
PER3P56645 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.7□□□□□ -0.22
PER3P56645 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
PER3P56645 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.7□□□□□ -0.22
PER3P56645 AC127383.1-201ENST00000444697 1800 ntBASIC13.7□□□□□ -0.22
PER3P56645 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
PER3P56645 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.7□□□□□ -0.22
PER3P56645 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.7□□□□□ -0.22
PER3P56645 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.7□□□□□ -0.22
PER3P56645 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.7□□□□□ -0.22
PER3P56645 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.7□□□□□ -0.22
PER3P56645 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.7□□□□□ -0.22
PER3P56645 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
PER3P56645 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.7□□□□□ -0.22
PER3P56645 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.7□□□□□ -0.22
PER3P56645 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.7□□□□□ -0.22
PER3P56645 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.7□□□□□ -0.22
PER3P56645 MIR4706-201ENST00000582134 82 ntBASIC13.7□□□□□ -0.22
PER3P56645 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.7□□□□□ -0.22
PER3P56645 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.7□□□□□ -0.22
PER3P56645 AL451050.2-201ENST00000606967 682 ntBASIC13.7□□□□□ -0.22
PER3P56645 AP001505.2-201ENST00000616815 443 ntBASIC13.7□□□□□ -0.22
PER3P56645 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.7□□□□□ -0.22
PER3P56645 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
PER3P56645 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.7□□□□□ -0.22
PER3P56645 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
PER3P56645 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.7□□□□□ -0.22
PER3P56645 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 MROH4P-201ENST00000431302 1578 ntBASIC13.7□□□□□ -0.22
PER3P56645 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 AGAP7P-201ENST00000582299 2062 ntBASIC13.7□□□□□ -0.22
PER3P56645 AGAP14-201ENST00000624701 2060 ntBASIC13.7□□□□□ -0.22
PER3P56645 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.7□□□□□ -0.22
PER3P56645 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.7□□□□□ -0.22
PER3P56645 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.7□□□□□ -0.22
PER3P56645 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PER3P56645 AC027612.1-201ENST00000445234 2395 ntBASIC13.69□□□□□ -0.22
PER3P56645 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
PER3P56645 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.69□□□□□ -0.22
PER3P56645 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
PER3P56645 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
PER3P56645 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
PER3P56645 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
PER3P56645 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
PER3P56645 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.69□□□□□ -0.22
PER3P56645 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.69□□□□□ -0.22
PER3P56645 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.69□□□□□ -0.22
PER3P56645 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.69□□□□□ -0.22
PER3P56645 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.69□□□□□ -0.22
PER3P56645 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.69□□□□□ -0.22
PER3P56645 GAPDHP40-201ENST00000505218 1006 ntBASIC13.69□□□□□ -0.22
PER3P56645 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.69□□□□□ -0.22
PER3P56645 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms