Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PSMD4P55036 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
PSMD4P55036 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
PSMD4P55036 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.72□□□□□ -0.21
PSMD4P55036 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
PSMD4P55036 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
PSMD4P55036 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
PSMD4P55036 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 AL136309.1-201ENST00000403917 691 ntBASIC13.72□□□□□ -0.21
PSMD4P55036 AC112492.5-201ENST00000421897 457 ntBASIC13.72□□□□□ -0.21
PSMD4P55036 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.72□□□□□ -0.21
PSMD4P55036 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.72□□□□□ -0.21
PSMD4P55036 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.72□□□□□ -0.21
PSMD4P55036 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.72□□□□□ -0.21
PSMD4P55036 AC104989.1-201ENST00000519711 778 ntBASIC13.72□□□□□ -0.21
PSMD4P55036 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.72□□□□□ -0.21
PSMD4P55036 RN7SL713P-201ENST00000582127 302 ntBASIC13.72□□□□□ -0.21
PSMD4P55036 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 ZACNP1-201ENST00000612259 710 ntBASIC13.72□□□□□ -0.21
PSMD4P55036 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.72□□□□□ -0.21
PSMD4P55036 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PSMD4P55036 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.72□□□□□ -0.21
PSMD4P55036 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.72□□□□□ -0.21
PSMD4P55036 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PSMD4P55036 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.72□□□□□ -0.21
PSMD4P55036 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
PSMD4P55036 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
PSMD4P55036 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.72□□□□□ -0.21
PSMD4P55036 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.72□□□□□ -0.21
PSMD4P55036 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.72□□□□□ -0.21
PSMD4P55036 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.71□□□□□ -0.21
PSMD4P55036 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.71□□□□□ -0.21
PSMD4P55036 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
PSMD4P55036 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PSMD4P55036 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.71□□□□□ -0.21
PSMD4P55036 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.71□□□□□ -0.21
PSMD4P55036 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.71□□□□□ -0.21
PSMD4P55036 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.71□□□□□ -0.21
PSMD4P55036 AL355994.2-201ENST00000447882 704 ntBASIC13.71□□□□□ -0.21
PSMD4P55036 CTBP2P5-201ENST00000454986 1264 ntBASIC13.71□□□□□ -0.21
PSMD4P55036 AL391280.1-201ENST00000506969 1062 ntBASIC13.71□□□□□ -0.21
PSMD4P55036 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.71□□□□□ -0.21
PSMD4P55036 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.71□□□□□ -0.21
PSMD4P55036 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 AL512343.1-201ENST00000605837 169 ntBASIC13.71□□□□□ -0.21
PSMD4P55036 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 AC002472.3-201ENST00000640124 621 ntBASIC13.71□□□□□ -0.21
PSMD4P55036 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PSMD4P55036 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.71□□□□□ -0.21
PSMD4P55036 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.71□□□□□ -0.21
PSMD4P55036 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PSMD4P55036 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PSMD4P55036 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PSMD4P55036 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
PSMD4P55036 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
PSMD4P55036 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
PSMD4P55036 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PSMD4P55036 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms