Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
NKX2-5P52952 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12.45□□□□□ -0.42
NKX2-5P52952 PMS2P4-201ENST00000412466 1052 ntBASIC12.45□□□□□ -0.42
NKX2-5P52952 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.45□□□□□ -0.42
NKX2-5P52952 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC12.45□□□□□ -0.42
NKX2-5P52952 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NKX2-5P52952 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.45□□□□□ -0.42
NKX2-5P52952 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.45□□□□□ -0.42
NKX2-5P52952 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.45□□□□□ -0.42
NKX2-5P52952 AL138966.2-201ENST00000621997 464 ntBASIC12.45□□□□□ -0.42
NKX2-5P52952 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
NKX2-5P52952 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 FAM156B-203ENST00000593751 2942 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
NKX2-5P52952 FAM156A-201ENST00000596733 2942 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
NKX2-5P52952 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC12.45□□□□□ -0.42
NKX2-5P52952 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 IKZF4-203ENST00000547167 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.45□□□□□ -0.42
NKX2-5P52952 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NKX2-5P52952 CTAGE10P-201ENST00000318353 2408 ntBASIC12.45□□□□□ -0.42
NKX2-5P52952 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
NKX2-5P52952 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
NKX2-5P52952 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC12.44□□□□□ -0.42
NKX2-5P52952 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.44□□□□□ -0.42
NKX2-5P52952 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC12.44□□□□□ -0.42
NKX2-5P52952 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 AL805961.2-201ENST00000642139 4817 ntBASIC12.44□□□□□ -0.42
NKX2-5P52952 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC12.44□□□□□ -0.42
NKX2-5P52952 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.44□□□□□ -0.42
NKX2-5P52952 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 CASP7-201ENST00000345633 2659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 ANKRD20A18P-201ENST00000359341 492 ntBASIC12.44□□□□□ -0.42
NKX2-5P52952 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC12.44□□□□□ -0.42
NKX2-5P52952 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 KRT18P34-201ENST00000488218 1270 ntBASIC12.44□□□□□ -0.42
NKX2-5P52952 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.44□□□□□ -0.42
NKX2-5P52952 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC12.44□□□□□ -0.42
NKX2-5P52952 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.44□□□□□ -0.42
NKX2-5P52952 AC090616.6-201ENST00000582640 721 ntBASIC12.44□□□□□ -0.42
NKX2-5P52952 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC12.44□□□□□ -0.42
NKX2-5P52952 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
NKX2-5P52952 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
NKX2-5P52952 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.44□□□□□ -0.42
NKX2-5P52952 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
NKX2-5P52952 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.44□□□□□ -0.42
NKX2-5P52952 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 CR2-203ENST00000367059 3877 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
NKX2-5P52952 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC12.44□□□□□ -0.42
NKX2-5P52952 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.44□□□□□ -0.42
NKX2-5P52952 OLFML2B-201ENST00000294794 3160 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC12.44□□□□□ -0.42
NKX2-5P52952 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
NKX2-5P52952 MAPK10-262ENST00000641051 5738 ntBASIC12.44□□□□□ -0.42
NKX2-5P52952 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
NKX2-5P52952 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-5P52952 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-5P52952 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NKX2-5P52952 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.43□□□□□ -0.42
NKX2-5P52952 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-5P52952 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-5P52952 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.43□□□□□ -0.42
NKX2-5P52952 PES1-203ENST00000402281 2760 ntTSL 2 BASIC12.43□□□□□ -0.42
NKX2-5P52952 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms