Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 NDUFS6P1-201ENST00000485187 316 ntBASIC17.34■□□□□ 0.37
TNNI2P48788 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC17.34■□□□□ 0.37
TNNI2P48788 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.34■□□□□ 0.37
TNNI2P48788 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
TNNI2P48788 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.34■□□□□ 0.37
TNNI2P48788 RPL17P45-201ENST00000586289 509 ntBASIC17.34■□□□□ 0.37
TNNI2P48788 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TNNI2P48788 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.34■□□□□ 0.37
TNNI2P48788 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNNI2P48788 AC009560.1-201ENST00000620208 434 ntBASIC17.34■□□□□ 0.37
TNNI2P48788 AC025271.4-201ENST00000621477 1726 ntBASIC17.34■□□□□ 0.37
TNNI2P48788 AC009084.3-201ENST00000623356 437 ntBASIC17.34■□□□□ 0.37
TNNI2P48788 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNNI2P48788 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.34■□□□□ 0.37
TNNI2P48788 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNNI2P48788 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.34■□□□□ 0.37
TNNI2P48788 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNNI2P48788 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TNNI2P48788 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.33■□□□□ 0.37
TNNI2P48788 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNNI2P48788 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNNI2P48788 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.33■□□□□ 0.37
TNNI2P48788 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNNI2P48788 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.33■□□□□ 0.37
TNNI2P48788 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.33■□□□□ 0.37
TNNI2P48788 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNNI2P48788 MARK2P16-201ENST00000605714 1723 ntBASIC17.33■□□□□ 0.37
TNNI2P48788 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.33■□□□□ 0.37
TNNI2P48788 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TNNI2P48788 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNNI2P48788 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNNI2P48788 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNNI2P48788 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TNNI2P48788 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNNI2P48788 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNNI2P48788 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TNNI2P48788 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TNNI2P48788 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNNI2P48788 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17.33■□□□□ 0.36
TNNI2P48788 CTBP2P4-201ENST00000513884 920 ntBASIC17.33■□□□□ 0.36
TNNI2P48788 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TNNI2P48788 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC17.33■□□□□ 0.36
TNNI2P48788 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNNI2P48788 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.33■□□□□ 0.36
TNNI2P48788 AL022334.2-201ENST00000610000 484 ntBASIC17.33■□□□□ 0.36
TNNI2P48788 TCAF2P1-201ENST00000291129 2421 ntBASIC17.33■□□□□ 0.36
TNNI2P48788 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.33■□□□□ 0.36
TNNI2P48788 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.33■□□□□ 0.36
TNNI2P48788 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNNI2P48788 AGAP7P-201ENST00000582299 2062 ntBASIC17.33■□□□□ 0.36
TNNI2P48788 AGAP14-201ENST00000624701 2060 ntBASIC17.33■□□□□ 0.36
TNNI2P48788 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TNNI2P48788 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNNI2P48788 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.33■□□□□ 0.36
TNNI2P48788 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNNI2P48788 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.33■□□□□ 0.36
TNNI2P48788 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TNNI2P48788 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TNNI2P48788 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNNI2P48788 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNNI2P48788 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.32■□□□□ 0.36
TNNI2P48788 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TNNI2P48788 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17.32■□□□□ 0.36
TNNI2P48788 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNNI2P48788 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNNI2P48788 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.32■□□□□ 0.36
TNNI2P48788 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.32■□□□□ 0.36
TNNI2P48788 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.32■□□□□ 0.36
TNNI2P48788 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNNI2P48788 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TNNI2P48788 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TNNI2P48788 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNNI2P48788 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC17.32■□□□□ 0.36
TNNI2P48788 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC17.32■□□□□ 0.36
TNNI2P48788 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.32■□□□□ 0.36
TNNI2P48788 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC17.32■□□□□ 0.36
TNNI2P48788 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.32■□□□□ 0.36
TNNI2P48788 AC018463.1-201ENST00000456674 917 ntBASIC17.32■□□□□ 0.36
TNNI2P48788 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.32■□□□□ 0.36
TNNI2P48788 RPL18AP3-201ENST00000462885 528 ntBASIC17.32■□□□□ 0.36
TNNI2P48788 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.32■□□□□ 0.36
TNNI2P48788 AP003398.1-201ENST00000531124 318 ntBASIC17.32■□□□□ 0.36
TNNI2P48788 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.32■□□□□ 0.36
TNNI2P48788 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNNI2P48788 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TNNI2P48788 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNNI2P48788 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.32■□□□□ 0.36
TNNI2P48788 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TNNI2P48788 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNNI2P48788 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNNI2P48788 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNNI2P48788 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.32■□□□□ 0.36
TNNI2P48788 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNNI2P48788 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNNI2P48788 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TNNI2P48788 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNNI2P48788 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNNI2P48788 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNNI2P48788 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.31■□□□□ 0.36
TNNI2P48788 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms