Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
BRCC3P46736 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
BRCC3P46736 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.52■□□□□ 0.07
BRCC3P46736 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.52■□□□□ 0.07
BRCC3P46736 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.52■□□□□ 0.07
BRCC3P46736 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
BRCC3P46736 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
BRCC3P46736 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.51■□□□□ 0.07
BRCC3P46736 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.51■□□□□ 0.07
BRCC3P46736 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.51■□□□□ 0.07
BRCC3P46736 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.51■□□□□ 0.07
BRCC3P46736 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 AC008723.1-201ENST00000506922 207 ntBASIC15.51■□□□□ 0.07
BRCC3P46736 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.51■□□□□ 0.07
BRCC3P46736 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.51■□□□□ 0.07
BRCC3P46736 MIR4706-201ENST00000582134 82 ntBASIC15.51■□□□□ 0.07
BRCC3P46736 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.51■□□□□ 0.07
BRCC3P46736 AL353726.2-201ENST00000623259 884 ntBASIC15.51■□□□□ 0.07
BRCC3P46736 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.51■□□□□ 0.07
BRCC3P46736 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
BRCC3P46736 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRCC3P46736 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRCC3P46736 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.5■□□□□ 0.07
BRCC3P46736 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.5■□□□□ 0.07
BRCC3P46736 MYADML-201ENST00000474610 2147 ntBASIC15.5■□□□□ 0.07
BRCC3P46736 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
BRCC3P46736 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRCC3P46736 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRCC3P46736 AC215219.1-201ENST00000400706 1817 ntBASIC15.5■□□□□ 0.07
BRCC3P46736 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BRCC3P46736 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BRCC3P46736 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.5■□□□□ 0.07
BRCC3P46736 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BRCC3P46736 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.5■□□□□ 0.07
BRCC3P46736 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRCC3P46736 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.5■□□□□ 0.07
BRCC3P46736 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
BRCC3P46736 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
BRCC3P46736 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRCC3P46736 MIR33B-201ENST00000385104 96 ntBASIC15.5■□□□□ 0.07
BRCC3P46736 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRCC3P46736 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.5■□□□□ 0.07
BRCC3P46736 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.5■□□□□ 0.07
BRCC3P46736 MAGEA5-201ENST00000446757 942 ntBASIC15.5■□□□□ 0.07
BRCC3P46736 FTLP1-201ENST00000449155 526 ntBASIC15.5■□□□□ 0.07
BRCC3P46736 RN7SL258P-201ENST00000478664 300 ntBASIC15.5■□□□□ 0.07
BRCC3P46736 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.5■□□□□ 0.07
BRCC3P46736 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.5■□□□□ 0.07
BRCC3P46736 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.5■□□□□ 0.07
BRCC3P46736 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
BRCC3P46736 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.5■□□□□ 0.07
BRCC3P46736 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.5■□□□□ 0.07
BRCC3P46736 LINC01783-202ENST00000614408 828 ntBASIC15.5■□□□□ 0.07
BRCC3P46736 BX284668.2-205ENST00000619677 828 ntBASIC15.5■□□□□ 0.07
BRCC3P46736 AC128714.1-201ENST00000637035 887 ntBASIC15.5■□□□□ 0.07
BRCC3P46736 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRCC3P46736 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BRCC3P46736 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
BRCC3P46736 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BRCC3P46736 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRCC3P46736 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
BRCC3P46736 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
BRCC3P46736 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRCC3P46736 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
BRCC3P46736 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
BRCC3P46736 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
BRCC3P46736 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
BRCC3P46736 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
BRCC3P46736 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
BRCC3P46736 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRCC3P46736 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRCC3P46736 AP002353.1-201ENST00000528257 1599 ntBASIC15.49■□□□□ 0.07
BRCC3P46736 INTS4P1-203ENST00000641008 3683 ntBASIC15.49■□□□□ 0.07
BRCC3P46736 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
BRCC3P46736 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
BRCC3P46736 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
BRCC3P46736 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRCC3P46736 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRCC3P46736 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms