Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC005586.2-201ENST00000563946 837 ntBASIC13.27□□□□□ -0.29
APOBEC1P41238 MIR4741-201ENST00000579822 90 ntBASIC13.27□□□□□ -0.29
APOBEC1P41238 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.27□□□□□ -0.29
APOBEC1P41238 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOBEC1P41238 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOBEC1P41238 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOBEC1P41238 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
APOBEC1P41238 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOBEC1P41238 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOBEC1P41238 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOBEC1P41238 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
APOBEC1P41238 AC015818.8-201ENST00000587907 1519 ntBASIC13.27□□□□□ -0.29
APOBEC1P41238 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOBEC1P41238 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOBEC1P41238 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOBEC1P41238 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.27□□□□□ -0.29
APOBEC1P41238 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOBEC1P41238 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOBEC1P41238 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOBEC1P41238 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.27□□□□□ -0.29
APOBEC1P41238 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.27□□□□□ -0.29
APOBEC1P41238 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.27□□□□□ -0.29
APOBEC1P41238 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.27□□□□□ -0.29
APOBEC1P41238 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOBEC1P41238 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
APOBEC1P41238 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.27□□□□□ -0.29
APOBEC1P41238 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.27□□□□□ -0.29
APOBEC1P41238 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.26□□□□□ -0.29
APOBEC1P41238 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
APOBEC1P41238 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.26□□□□□ -0.29
APOBEC1P41238 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
APOBEC1P41238 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
APOBEC1P41238 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
APOBEC1P41238 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
APOBEC1P41238 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.26□□□□□ -0.29
APOBEC1P41238 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.26□□□□□ -0.29
APOBEC1P41238 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.26□□□□□ -0.29
APOBEC1P41238 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.26□□□□□ -0.29
APOBEC1P41238 E2F3P2-201ENST00000447755 1422 ntBASIC13.26□□□□□ -0.29
APOBEC1P41238 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.26□□□□□ -0.29
APOBEC1P41238 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.26□□□□□ -0.29
APOBEC1P41238 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.26□□□□□ -0.29
APOBEC1P41238 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.26□□□□□ -0.29
APOBEC1P41238 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.26□□□□□ -0.29
APOBEC1P41238 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.26□□□□□ -0.29
APOBEC1P41238 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
APOBEC1P41238 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 MIR4259-201ENST00000584466 101 ntBASIC13.26□□□□□ -0.29
APOBEC1P41238 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.26□□□□□ -0.29
APOBEC1P41238 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.26□□□□□ -0.29
APOBEC1P41238 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOBEC1P41238 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
APOBEC1P41238 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.25□□□□□ -0.29
APOBEC1P41238 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.25□□□□□ -0.29
APOBEC1P41238 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
APOBEC1P41238 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 AC152010.1-201ENST00000415779 2006 ntBASIC13.25□□□□□ -0.29
APOBEC1P41238 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.25□□□□□ -0.29
APOBEC1P41238 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.25□□□□□ -0.29
APOBEC1P41238 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.25□□□□□ -0.29
APOBEC1P41238 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 AC139749.1-202ENST00000617529 3139 ntBASIC13.25□□□□□ -0.29
APOBEC1P41238 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.25□□□□□ -0.29
APOBEC1P41238 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
APOBEC1P41238 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.25□□□□□ -0.29
APOBEC1P41238 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.25□□□□□ -0.29
APOBEC1P41238 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms