Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.56■□□□□ 0.08
PBX3P40426 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.56■□□□□ 0.08
PBX3P40426 MIR3180-2-201ENST00000581748 88 ntBASIC15.56■□□□□ 0.08
PBX3P40426 RN7SL725P-201ENST00000606439 259 ntBASIC15.56■□□□□ 0.08
PBX3P40426 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.56■□□□□ 0.08
PBX3P40426 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PBX3P40426 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PBX3P40426 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PBX3P40426 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PBX3P40426 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PBX3P40426 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PBX3P40426 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PBX3P40426 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.56■□□□□ 0.08
PBX3P40426 TCAF2P1-201ENST00000291129 2421 ntBASIC15.56■□□□□ 0.08
PBX3P40426 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.56■□□□□ 0.08
PBX3P40426 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PBX3P40426 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PBX3P40426 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.56■□□□□ 0.08
PBX3P40426 AC018529.2-202ENST00000611482 3087 ntBASIC15.56■□□□□ 0.08
PBX3P40426 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PBX3P40426 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PBX3P40426 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PBX3P40426 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PBX3P40426 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.56■□□□□ 0.08
PBX3P40426 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PBX3P40426 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.55■□□□□ 0.08
PBX3P40426 DBET-201ENST00000630918 3363 ntBASIC15.55■□□□□ 0.08
PBX3P40426 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PBX3P40426 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.55■□□□□ 0.08
PBX3P40426 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.55■□□□□ 0.08
PBX3P40426 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.55■□□□□ 0.08
PBX3P40426 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 AP002353.1-201ENST00000528257 1599 ntBASIC15.55■□□□□ 0.08
PBX3P40426 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.55■□□□□ 0.08
PBX3P40426 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PBX3P40426 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.55■□□□□ 0.08
PBX3P40426 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PBX3P40426 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 AC012362.1-201ENST00000434906 739 ntBASIC15.55■□□□□ 0.08
PBX3P40426 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.55■□□□□ 0.08
PBX3P40426 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.55■□□□□ 0.08
PBX3P40426 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.55■□□□□ 0.08
PBX3P40426 CHCHD2P9-201ENST00000461726 456 ntBASIC15.55■□□□□ 0.08
PBX3P40426 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.55■□□□□ 0.08
PBX3P40426 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.55■□□□□ 0.08
PBX3P40426 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.55■□□□□ 0.08
PBX3P40426 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PBX3P40426 AC025262.2-201ENST00000623975 1056 ntBASIC15.55■□□□□ 0.08
PBX3P40426 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.55■□□□□ 0.08
PBX3P40426 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PBX3P40426 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
PBX3P40426 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.55■□□□□ 0.08
PBX3P40426 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.55■□□□□ 0.08
PBX3P40426 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.55■□□□□ 0.08
PBX3P40426 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.55■□□□□ 0.08
PBX3P40426 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
PBX3P40426 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PBX3P40426 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PBX3P40426 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PBX3P40426 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PBX3P40426 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PBX3P40426 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PBX3P40426 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PBX3P40426 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.54■□□□□ 0.08
PBX3P40426 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.54■□□□□ 0.08
PBX3P40426 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PBX3P40426 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PBX3P40426 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PBX3P40426 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.54■□□□□ 0.08
PBX3P40426 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PBX3P40426 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.54■□□□□ 0.08
PBX3P40426 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PBX3P40426 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PBX3P40426 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PBX3P40426 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PBX3P40426 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PBX3P40426 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms