Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CLCN1P35523 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CLCN1P35523 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN1P35523 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CLCN1P35523 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC16.77■□□□□ 0.27
CLCN1P35523 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN1P35523 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
CLCN1P35523 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CLCN1P35523 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CLCN1P35523 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN1P35523 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN1P35523 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CLCN1P35523 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN1P35523 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CLCN1P35523 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CLCN1P35523 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CLCN1P35523 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.76■□□□□ 0.27
CLCN1P35523 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC16.76■□□□□ 0.27
CLCN1P35523 Z98257.2-202ENST00000641138 1548 ntBASIC16.76■□□□□ 0.27
CLCN1P35523 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
CLCN1P35523 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC16.76■□□□□ 0.27
CLCN1P35523 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 TREML5P-201ENST00000421694 576 ntBASIC16.76■□□□□ 0.27
CLCN1P35523 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.76■□□□□ 0.27
CLCN1P35523 AC067863.1-201ENST00000494933 530 ntBASIC16.76■□□□□ 0.27
CLCN1P35523 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.76■□□□□ 0.27
CLCN1P35523 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.76■□□□□ 0.27
CLCN1P35523 RN7SL275P-201ENST00000582762 335 ntBASIC16.76■□□□□ 0.27
CLCN1P35523 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 AL844908.2-201ENST00000609461 460 ntBASIC16.76■□□□□ 0.27
CLCN1P35523 AL590560.3-201ENST00000623350 461 ntBASIC16.76■□□□□ 0.27
CLCN1P35523 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.76■□□□□ 0.27
CLCN1P35523 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.76■□□□□ 0.27
CLCN1P35523 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLCN1P35523 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.76■□□□□ 0.27
CLCN1P35523 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CLCN1P35523 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC16.76■□□□□ 0.27
CLCN1P35523 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC16.76■□□□□ 0.27
CLCN1P35523 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC16.76■□□□□ 0.27
CLCN1P35523 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLCN1P35523 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.76■□□□□ 0.27
CLCN1P35523 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC16.76■□□□□ 0.27
CLCN1P35523 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.76■□□□□ 0.27
CLCN1P35523 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN1P35523 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 AC090643.2-201ENST00000623442 2029 ntBASIC16.75■□□□□ 0.27
CLCN1P35523 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 AC087499.5-201ENST00000452760 1342 ntBASIC16.75■□□□□ 0.27
CLCN1P35523 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CLCN1P35523 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.75■□□□□ 0.27
CLCN1P35523 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCN1P35523 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.75■□□□□ 0.27
CLCN1P35523 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.75■□□□□ 0.27
CLCN1P35523 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCN1P35523 SLED1-202ENST00000512051 380 ntBASIC16.75■□□□□ 0.27
CLCN1P35523 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCN1P35523 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 DUX4L27-201ENST00000554796 1261 ntBASIC16.75■□□□□ 0.27
CLCN1P35523 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLCN1P35523 AL158211.3-201ENST00000607385 239 ntBASIC16.75■□□□□ 0.27
CLCN1P35523 AC006538.3-201ENST00000612495 578 ntBASIC16.75■□□□□ 0.27
CLCN1P35523 AL109936.8-201ENST00000641772 604 ntBASIC16.75■□□□□ 0.27
CLCN1P35523 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCN1P35523 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.75■□□□□ 0.27
CLCN1P35523 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN1P35523 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCN1P35523 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms