Protein–RNA interactions for Protein: P26358

DNMT1, DNA (cytosine-5)-methyltransferase 1, humanhuman

Known RBP Predictions only

Length 1,616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1P26358 RN7SL767P-201ENST00000493013 295 ntBASIC21.31■■□□□ 1
DNMT1P26358 AC093826.1-201ENST00000508655 993 ntBASIC21.31■■□□□ 1
DNMT1P26358 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC21.31■■□□□ 1
DNMT1P26358 THY1-209ENST00000580275 578 ntTSL 3 BASIC21.31■■□□□ 1
DNMT1P26358 AL118522.1-201ENST00000611368 560 ntBASIC21.31■■□□□ 1
DNMT1P26358 AL031673.1-201ENST00000611460 466 ntBASIC21.31■■□□□ 1
DNMT1P26358 AQP7P3-201ENST00000624547 1041 ntBASIC21.31■■□□□ 1
DNMT1P26358 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC21.31■■□□□ 1
DNMT1P26358 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DNMT1P26358 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DNMT1P26358 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
DNMT1P26358 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC21.31■■□□□ 1
DNMT1P26358 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
DNMT1P26358 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
DNMT1P26358 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC21.31■■□□□ 1
DNMT1P26358 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC21.31■■□□□ 1
DNMT1P26358 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC21.31■■□□□ 1
DNMT1P26358 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DNMT1P26358 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
DNMT1P26358 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
DNMT1P26358 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
DNMT1P26358 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DNMT1P26358 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
DNMT1P26358 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DNMT1P26358 GOLGA8UP-201ENST00000527159 1755 ntBASIC21.3■■□□□ 1
DNMT1P26358 AC140479.7-201ENST00000636301 2332 ntBASIC21.3■■□□□ 1
DNMT1P26358 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DNMT1P26358 SAT1-201ENST00000379251 801 ntTSL 2 BASIC21.3■■□□□ 1
DNMT1P26358 SAT1-202ENST00000379253 909 ntTSL 2 BASIC21.3■■□□□ 1
DNMT1P26358 SAT1-203ENST00000379254 868 ntTSL 3 BASIC21.3■■□□□ 1
DNMT1P26358 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DNMT1P26358 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
DNMT1P26358 AC244197.1-201ENST00000456494 951 ntBASIC21.3■■□□□ 1
DNMT1P26358 SNORD3B-1-201ENST00000577988 758 ntBASIC21.3■■□□□ 1
DNMT1P26358 AC091769.1-201ENST00000619576 568 ntBASIC21.3■■□□□ 1
DNMT1P26358 LINC00244-201ENST00000625073 613 ntBASIC21.3■■□□□ 1
DNMT1P26358 AL451007.2-201ENST00000632004 563 ntBASIC21.3■■□□□ 1
DNMT1P26358 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DNMT1P26358 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
DNMT1P26358 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC21.3■■□□□ 1
DNMT1P26358 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DNMT1P26358 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC21.3■■□□□ 1
DNMT1P26358 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
DNMT1P26358 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DNMT1P26358 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC21.3■■□□□ 1
DNMT1P26358 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
DNMT1P26358 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC21.3■■□□□ 1
DNMT1P26358 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC21.3■■□□□ 1
DNMT1P26358 AL139158.3-201ENST00000641212 1562 ntBASIC21.3■■□□□ 1
DNMT1P26358 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DNMT1P26358 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DNMT1P26358 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
DNMT1P26358 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC21.29■■□□□ 1
DNMT1P26358 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC21.29■■□□□ 1
DNMT1P26358 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC21.29■■□□□ 1
DNMT1P26358 GOLGA2P8-201ENST00000505201 779 ntBASIC21.29■■□□□ 1
DNMT1P26358 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC21.29■■□□□ 1
DNMT1P26358 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC21.29■■□□□ 1
DNMT1P26358 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC21.29■■□□□ 1
DNMT1P26358 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC21.29■■□□□ 1
DNMT1P26358 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
DNMT1P26358 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
DNMT1P26358 AC011471.3-201ENST00000623576 402 ntBASIC21.29■■□□□ 1
DNMT1P26358 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC21.29■■□□□ 1
DNMT1P26358 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
DNMT1P26358 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.29■■□□□ 1
DNMT1P26358 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
DNMT1P26358 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC21.29■■□□□ 1
DNMT1P26358 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC21.29■■□□□ 1
DNMT1P26358 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
DNMT1P26358 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DNMT1P26358 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
DNMT1P26358 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
DNMT1P26358 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC21.29■■□□□ 1
DNMT1P26358 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC21.29■■□□□ 1
DNMT1P26358 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC21.29■■□□□ 1
DNMT1P26358 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
DNMT1P26358 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
DNMT1P26358 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC21.29■■□□□ 1
DNMT1P26358 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DNMT1P26358 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
DNMT1P26358 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
DNMT1P26358 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC21.29■■□□□ 1
DNMT1P26358 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC21.29■■□□□ 1
DNMT1P26358 AC015909.5-201ENST00000624336 2266 ntBASIC21.29■■□□□ 1
DNMT1P26358 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DNMT1P26358 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DNMT1P26358 OR52M2P-201ENST00000414298 959 ntBASIC21.29■■□□□ 1
DNMT1P26358 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC21.29■■□□□ 1
DNMT1P26358 COX5A-205ENST00000568517 582 ntTSL 3 BASIC21.29■■□□□ 1
DNMT1P26358 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC21.29■■□□□ 1
DNMT1P26358 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
DNMT1P26358 MME-218ENST00000625667 363 ntTSL 5 BASIC21.29■■□□□ 1
DNMT1P26358 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC21.29■■□□□ 1
DNMT1P26358 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
DNMT1P26358 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC21.29■■□□□ 1
DNMT1P26358 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
DNMT1P26358 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DNMT1P26358 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC21.28■■□□□ 1
DNMT1P26358 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms