Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MSR1P21757 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MSR1P21757 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.01□□□□□ -0.33
MSR1P21757 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MSR1P21757 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MSR1P21757 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MSR1P21757 AL035633.1-201ENST00000406139 838 ntBASIC13.01□□□□□ -0.33
MSR1P21757 ARSEP1-201ENST00000420443 635 ntBASIC13.01□□□□□ -0.33
MSR1P21757 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.01□□□□□ -0.33
MSR1P21757 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.01□□□□□ -0.33
MSR1P21757 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.01□□□□□ -0.33
MSR1P21757 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.01□□□□□ -0.33
MSR1P21757 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.01□□□□□ -0.33
MSR1P21757 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.01□□□□□ -0.33
MSR1P21757 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MSR1P21757 AC002472.3-201ENST00000640124 621 ntBASIC13.01□□□□□ -0.33
MSR1P21757 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.01□□□□□ -0.33
MSR1P21757 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
MSR1P21757 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.01□□□□□ -0.33
MSR1P21757 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.01□□□□□ -0.33
MSR1P21757 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MSR1P21757 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MSR1P21757 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MSR1P21757 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.01□□□□□ -0.33
MSR1P21757 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MSR1P21757 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MSR1P21757 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.01□□□□□ -0.33
MSR1P21757 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MSR1P21757 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MSR1P21757 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MSR1P21757 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
MSR1P21757 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.01□□□□□ -0.33
MSR1P21757 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MSR1P21757 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13□□□□□ -0.33
MSR1P21757 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
MSR1P21757 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
MSR1P21757 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
MSR1P21757 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13□□□□□ -0.33
MSR1P21757 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13□□□□□ -0.33
MSR1P21757 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 PEG13-201ENST00000631594 5667 ntBASIC13□□□□□ -0.33
MSR1P21757 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 AC090505.1-201ENST00000430515 1834 ntBASIC13□□□□□ -0.33
MSR1P21757 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13□□□□□ -0.33
MSR1P21757 KHSRPP1-201ENST00000427983 1768 ntBASIC13□□□□□ -0.33
MSR1P21757 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 GRK6P1-201ENST00000400595 1711 ntBASIC13□□□□□ -0.33
MSR1P21757 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
MSR1P21757 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
MSR1P21757 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13□□□□□ -0.33
MSR1P21757 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 COPE-202ENST00000349893 948 ntTSL 2 BASIC13□□□□□ -0.33
MSR1P21757 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
MSR1P21757 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13□□□□□ -0.33
MSR1P21757 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13□□□□□ -0.33
MSR1P21757 COX5BP1-201ENST00000507622 393 ntBASIC13□□□□□ -0.33
MSR1P21757 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13□□□□□ -0.33
MSR1P21757 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13□□□□□ -0.33
MSR1P21757 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13□□□□□ -0.33
MSR1P21757 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13□□□□□ -0.33
MSR1P21757 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
MSR1P21757 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
MSR1P21757 RN7SL713P-201ENST00000582127 302 ntBASIC13□□□□□ -0.33
MSR1P21757 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13□□□□□ -0.33
MSR1P21757 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13□□□□□ -0.33
MSR1P21757 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
MSR1P21757 AC012645.4-201ENST00000610691 1061 ntBASIC13□□□□□ -0.33
MSR1P21757 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13□□□□□ -0.33
MSR1P21757 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
MSR1P21757 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
MSR1P21757 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
MSR1P21757 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MSR1P21757 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.99□□□□□ -0.33
MSR1P21757 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
MSR1P21757 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 LINC01230-201ENST00000625222 3017 ntBASIC12.99□□□□□ -0.33
MSR1P21757 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.99□□□□□ -0.33
MSR1P21757 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MSR1P21757 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.99□□□□□ -0.33
MSR1P21757 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms