Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLP19338 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLP19338 GALC-206ENST00000544807 2528 ntTSL 2 BASIC17.62■□□□□ 0.41
NCLP19338 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC17.62■□□□□ 0.41
NCLP19338 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLP19338 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLP19338 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.62■□□□□ 0.41
NCLP19338 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLP19338 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLP19338 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLP19338 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NCLP19338 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NCLP19338 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLP19338 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NCLP19338 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLP19338 DGCR9-201ENST00000609630 2415 ntBASIC17.61■□□□□ 0.41
NCLP19338 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NCLP19338 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NCLP19338 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.61■□□□□ 0.41
NCLP19338 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLP19338 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NCLP19338 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NCLP19338 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLP19338 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLP19338 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLP19338 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLP19338 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLP19338 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.61■□□□□ 0.41
NCLP19338 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.61■□□□□ 0.41
NCLP19338 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NCLP19338 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.61■□□□□ 0.41
NCLP19338 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NCLP19338 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.61■□□□□ 0.41
NCLP19338 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.61■□□□□ 0.41
NCLP19338 AC010336.2-201ENST00000564226 506 ntBASIC17.61■□□□□ 0.41
NCLP19338 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLP19338 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.61■□□□□ 0.41
NCLP19338 AC004840.1-201ENST00000636359 365 ntBASIC17.61■□□□□ 0.41
NCLP19338 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLP19338 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLP19338 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NCLP19338 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLP19338 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.61■□□□□ 0.41
NCLP19338 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NCLP19338 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLP19338 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCLP19338 AC130686.1-201ENST00000622936 2466 ntBASIC17.6■□□□□ 0.41
NCLP19338 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCLP19338 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCLP19338 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NCLP19338 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCLP19338 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCLP19338 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NCLP19338 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NCLP19338 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCLP19338 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCLP19338 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.6■□□□□ 0.41
NCLP19338 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.6■□□□□ 0.41
NCLP19338 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCLP19338 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.6■□□□□ 0.41
NCLP19338 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.6■□□□□ 0.41
NCLP19338 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.6■□□□□ 0.41
NCLP19338 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCLP19338 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCLP19338 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCLP19338 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.6■□□□□ 0.41
NCLP19338 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.6■□□□□ 0.41
NCLP19338 AC004233.3-201ENST00000607794 1269 ntBASIC17.6■□□□□ 0.41
NCLP19338 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.6■□□□□ 0.41
NCLP19338 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCLP19338 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCLP19338 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC17.6■□□□□ 0.41
NCLP19338 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.6■□□□□ 0.41
NCLP19338 BTBD7P1-201ENST00000447253 1453 ntBASIC17.6■□□□□ 0.41
NCLP19338 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NCLP19338 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCLP19338 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
NCLP19338 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCLP19338 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.6■□□□□ 0.41
NCLP19338 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC17.6■□□□□ 0.41
NCLP19338 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NCLP19338 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC17.6■□□□□ 0.41
NCLP19338 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NCLP19338 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCLP19338 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCLP19338 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCLP19338 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCLP19338 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCLP19338 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCLP19338 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC17.59■□□□□ 0.41
NCLP19338 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC17.59■□□□□ 0.41
NCLP19338 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NCLP19338 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.59■□□□□ 0.41
NCLP19338 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC17.59■□□□□ 0.41
NCLP19338 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC17.59■□□□□ 0.41
NCLP19338 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCLP19338 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
NCLP19338 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.59■□□□□ 0.41
NCLP19338 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.59■□□□□ 0.41
NCLP19338 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms