Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 ANKRD19P-201ENST00000338192 862 ntBASIC13.18□□□□□ -0.3
HLA-DOBP13765 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 AC026954.1-201ENST00000429771 1293 ntBASIC13.18□□□□□ -0.3
HLA-DOBP13765 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 CTBP2P5-201ENST00000454986 1264 ntBASIC13.18□□□□□ -0.3
HLA-DOBP13765 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 SNX29P1-201ENST00000548357 1007 ntBASIC13.18□□□□□ -0.3
HLA-DOBP13765 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 AC106886.1-201ENST00000568660 600 ntBASIC13.18□□□□□ -0.3
HLA-DOBP13765 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 AL358472.3-201ENST00000608147 415 ntBASIC13.18□□□□□ -0.3
HLA-DOBP13765 AL162274.1-201ENST00000617191 1098 ntBASIC13.18□□□□□ -0.3
HLA-DOBP13765 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 AC090505.1-201ENST00000430515 1834 ntBASIC13.18□□□□□ -0.3
HLA-DOBP13765 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 CICP16-201ENST00000502609 2813 ntBASIC13.17□□□□□ -0.3
HLA-DOBP13765 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 AC234783.1-201ENST00000441761 496 ntBASIC13.17□□□□□ -0.3
HLA-DOBP13765 KLF2P4-201ENST00000451959 1225 ntBASIC13.17□□□□□ -0.3
HLA-DOBP13765 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 RAB43P1-201ENST00000561790 589 ntBASIC13.17□□□□□ -0.3
HLA-DOBP13765 C2orf69P2-201ENST00000562032 1123 ntBASIC13.17□□□□□ -0.3
HLA-DOBP13765 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 PPY2P-201ENST00000582808 702 ntBASIC13.17□□□□□ -0.3
HLA-DOBP13765 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.17□□□□□ -0.3
HLA-DOBP13765 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 AC136759.1-202ENST00000530858 2194 ntBASIC13.17□□□□□ -0.3
HLA-DOBP13765 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DOBP13765 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms