Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSF1P09603 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSF1P09603 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
CSF1P09603 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSF1P09603 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.79□□□□□ -0.36
CSF1P09603 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSF1P09603 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.79□□□□□ -0.36
CSF1P09603 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSF1P09603 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSF1P09603 AC020658.7-201ENST00000624274 2442 ntBASIC12.79□□□□□ -0.36
CSF1P09603 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
CSF1P09603 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSF1P09603 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CSF1P09603 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.79□□□□□ -0.36
CSF1P09603 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.79□□□□□ -0.36
CSF1P09603 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CSF1P09603 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSF1P09603 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSF1P09603 CETN4P-206ENST00000642099 2168 ntBASIC12.79□□□□□ -0.36
CSF1P09603 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSF1P09603 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CSF1P09603 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.78□□□□□ -0.36
CSF1P09603 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CSF1P09603 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.78□□□□□ -0.36
CSF1P09603 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.78□□□□□ -0.36
CSF1P09603 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CSF1P09603 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.78□□□□□ -0.36
CSF1P09603 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CSF1P09603 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.78□□□□□ -0.36
CSF1P09603 MTND6P24-201ENST00000440466 518 ntBASIC12.78□□□□□ -0.36
CSF1P09603 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.78□□□□□ -0.36
CSF1P09603 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.78□□□□□ -0.36
CSF1P09603 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.78□□□□□ -0.36
CSF1P09603 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.78□□□□□ -0.36
CSF1P09603 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.78□□□□□ -0.36
CSF1P09603 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.78□□□□□ -0.36
CSF1P09603 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.78□□□□□ -0.36
CSF1P09603 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.78□□□□□ -0.36
CSF1P09603 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.78□□□□□ -0.36
CSF1P09603 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.78□□□□□ -0.36
CSF1P09603 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.78□□□□□ -0.36
CSF1P09603 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.78□□□□□ -0.36
CSF1P09603 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CSF1P09603 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 RN7SL832P-201ENST00000607781 1756 ntBASIC12.78□□□□□ -0.36
CSF1P09603 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.78□□□□□ -0.36
CSF1P09603 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.78□□□□□ -0.36
CSF1P09603 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.78□□□□□ -0.36
CSF1P09603 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.78□□□□□ -0.36
CSF1P09603 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CSF1P09603 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CSF1P09603 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSF1P09603 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.78□□□□□ -0.36
CSF1P09603 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CSF1P09603 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CSF1P09603 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CSF1P09603 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CSF1P09603 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CSF1P09603 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CSF1P09603 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CSF1P09603 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CSF1P09603 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CSF1P09603 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.77□□□□□ -0.36
CSF1P09603 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CSF1P09603 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CSF1P09603 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CSF1P09603 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CSF1P09603 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CSF1P09603 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CSF1P09603 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.77□□□□□ -0.36
CSF1P09603 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
CSF1P09603 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
CSF1P09603 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CSF1P09603 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CSF1P09603 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms