Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
COL5A2P05997 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
COL5A2P05997 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
COL5A2P05997 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.72■□□□□ 0.59
COL5A2P05997 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC18.72■□□□□ 0.59
COL5A2P05997 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
COL5A2P05997 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
COL5A2P05997 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COL5A2P05997 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL5A2P05997 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL5A2P05997 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL5A2P05997 NHP2P1-201ENST00000335274 462 ntBASIC18.71■□□□□ 0.59
COL5A2P05997 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL5A2P05997 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL5A2P05997 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL5A2P05997 SSR4-202ENST00000370085 526 ntTSL 2 BASIC18.71■□□□□ 0.59
COL5A2P05997 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC18.71■□□□□ 0.59
COL5A2P05997 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC18.71■□□□□ 0.59
COL5A2P05997 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC18.71■□□□□ 0.59
COL5A2P05997 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL5A2P05997 AL359219.1-201ENST00000556311 934 ntBASIC18.71■□□□□ 0.59
COL5A2P05997 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
COL5A2P05997 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COL5A2P05997 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC18.71■□□□□ 0.59
COL5A2P05997 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
COL5A2P05997 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL5A2P05997 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL5A2P05997 AGAP7P-201ENST00000582299 2062 ntBASIC18.71■□□□□ 0.59
COL5A2P05997 AGAP14-201ENST00000624701 2060 ntBASIC18.71■□□□□ 0.59
COL5A2P05997 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
COL5A2P05997 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC18.71■□□□□ 0.59
COL5A2P05997 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
COL5A2P05997 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
COL5A2P05997 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL5A2P05997 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC18.71■□□□□ 0.59
COL5A2P05997 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COL5A2P05997 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL5A2P05997 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL5A2P05997 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL5A2P05997 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC18.71■□□□□ 0.59
COL5A2P05997 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL5A2P05997 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL5A2P05997 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL5A2P05997 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
COL5A2P05997 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.71■□□□□ 0.59
COL5A2P05997 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL5A2P05997 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
COL5A2P05997 CDCA4P4-201ENST00000435216 680 ntBASIC18.71■□□□□ 0.59
COL5A2P05997 ZNF877P-201ENST00000437614 612 ntBASIC18.71■□□□□ 0.59
COL5A2P05997 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC18.71■□□□□ 0.59
COL5A2P05997 AC004686.1-201ENST00000605113 538 ntBASIC18.71■□□□□ 0.59
COL5A2P05997 URAHP-205ENST00000610227 398 ntBASIC18.71■□□□□ 0.59
COL5A2P05997 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL5A2P05997 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
COL5A2P05997 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
COL5A2P05997 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.7■□□□□ 0.58
COL5A2P05997 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL5A2P05997 AC007952.5-201ENST00000572818 1486 ntBASIC18.7■□□□□ 0.58
COL5A2P05997 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
COL5A2P05997 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL5A2P05997 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.7■□□□□ 0.58
COL5A2P05997 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL5A2P05997 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL5A2P05997 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
COL5A2P05997 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL5A2P05997 SNORA57-201ENST00000383870 149 ntBASIC18.7■□□□□ 0.58
COL5A2P05997 AC103592.1-201ENST00000394513 664 ntBASIC18.7■□□□□ 0.58
COL5A2P05997 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC18.7■□□□□ 0.58
COL5A2P05997 AC092612.1-201ENST00000514501 998 ntBASIC18.7■□□□□ 0.58
COL5A2P05997 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL5A2P05997 AL512310.5-201ENST00000551999 515 ntBASIC18.7■□□□□ 0.58
COL5A2P05997 AC132825.4-202ENST00000578792 434 ntBASIC18.7■□□□□ 0.58
COL5A2P05997 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC18.7■□□□□ 0.58
COL5A2P05997 MIR6074-201ENST00000612054 107 ntBASIC18.7■□□□□ 0.58
COL5A2P05997 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
COL5A2P05997 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL5A2P05997 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC18.7■□□□□ 0.58
COL5A2P05997 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
COL5A2P05997 RPL13AP3-202ENST00000494676 1473 ntBASIC18.69■□□□□ 0.58
COL5A2P05997 AC018529.2-202ENST00000611482 3087 ntBASIC18.69■□□□□ 0.58
COL5A2P05997 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL5A2P05997 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COL5A2P05997 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC18.69■□□□□ 0.58
COL5A2P05997 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COL5A2P05997 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL5A2P05997 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC18.69■□□□□ 0.58
COL5A2P05997 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC18.69■□□□□ 0.58
COL5A2P05997 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL5A2P05997 AC007950.2-201ENST00000615045 2347 ntBASIC18.69■□□□□ 0.58
COL5A2P05997 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
COL5A2P05997 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL5A2P05997 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL5A2P05997 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL5A2P05997 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL5A2P05997 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL5A2P05997 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC18.69■□□□□ 0.58
COL5A2P05997 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC18.69■□□□□ 0.58
COL5A2P05997 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
COL5A2P05997 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL5A2P05997 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms