Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
POLR3DP05423 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
POLR3DP05423 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.53■□□□□ 0.4
POLR3DP05423 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.53■□□□□ 0.4
POLR3DP05423 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
POLR3DP05423 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 MARK2P5-201ENST00000507649 634 ntBASIC17.53■□□□□ 0.4
POLR3DP05423 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
POLR3DP05423 SNORD3B-2-202ENST00000571722 791 ntBASIC17.53■□□□□ 0.4
POLR3DP05423 RN7SL774P-201ENST00000577467 290 ntBASIC17.53■□□□□ 0.4
POLR3DP05423 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
POLR3DP05423 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
POLR3DP05423 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.53■□□□□ 0.4
POLR3DP05423 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
POLR3DP05423 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.53■□□□□ 0.4
POLR3DP05423 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
POLR3DP05423 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR3DP05423 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.52■□□□□ 0.4
POLR3DP05423 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3DP05423 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3DP05423 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3DP05423 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.52■□□□□ 0.4
POLR3DP05423 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3DP05423 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3DP05423 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3DP05423 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3DP05423 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3DP05423 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3DP05423 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3DP05423 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3DP05423 AL662890.1-201ENST00000396818 632 ntBASIC17.52■□□□□ 0.4
POLR3DP05423 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3DP05423 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.52■□□□□ 0.4
POLR3DP05423 VDAC1P1-201ENST00000439229 848 ntBASIC17.52■□□□□ 0.4
POLR3DP05423 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3DP05423 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.52■□□□□ 0.4
POLR3DP05423 RN7SL11P-201ENST00000471305 293 ntBASIC17.52■□□□□ 0.4
POLR3DP05423 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.52■□□□□ 0.4
POLR3DP05423 HLA-J-204ENST00000495278 958 ntBASIC17.52■□□□□ 0.4
POLR3DP05423 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.52■□□□□ 0.4
POLR3DP05423 SCARNA21-201ENST00000517026 139 ntBASIC17.52■□□□□ 0.4
POLR3DP05423 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3DP05423 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3DP05423 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
POLR3DP05423 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.52■□□□□ 0.4
POLR3DP05423 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
POLR3DP05423 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.52■□□□□ 0.4
POLR3DP05423 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.52■□□□□ 0.4
POLR3DP05423 AL805961.1-203ENST00000641078 1258 ntBASIC17.52■□□□□ 0.4
POLR3DP05423 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
POLR3DP05423 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3DP05423 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
POLR3DP05423 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3DP05423 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.52■□□□□ 0.4
POLR3DP05423 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
POLR3DP05423 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR3DP05423 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR3DP05423 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR3DP05423 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR3DP05423 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR3DP05423 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.52■□□□□ 0.39
POLR3DP05423 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR3DP05423 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR3DP05423 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR3DP05423 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR3DP05423 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR3DP05423 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR3DP05423 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR3DP05423 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
POLR3DP05423 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.51■□□□□ 0.39
POLR3DP05423 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.51■□□□□ 0.39
POLR3DP05423 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3DP05423 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3DP05423 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3DP05423 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3DP05423 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms