Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGN1P05114 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.37□□□□□ -0.27
HMGN1P05114 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGN1P05114 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HMGN1P05114 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGN1P05114 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HMGN1P05114 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGN1P05114 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HMGN1P05114 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HMGN1P05114 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGN1P05114 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGN1P05114 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGN1P05114 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
HMGN1P05114 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HMGN1P05114 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGN1P05114 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HMGN1P05114 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.36□□□□□ -0.27
HMGN1P05114 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HMGN1P05114 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGN1P05114 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.36□□□□□ -0.27
HMGN1P05114 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
HMGN1P05114 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGN1P05114 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HMGN1P05114 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.36□□□□□ -0.27
HMGN1P05114 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGN1P05114 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HMGN1P05114 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.36□□□□□ -0.27
HMGN1P05114 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.36□□□□□ -0.27
HMGN1P05114 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HMGN1P05114 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGN1P05114 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HMGN1P05114 AC011498.7-201ENST00000624986 2027 ntBASIC13.36□□□□□ -0.27
HMGN1P05114 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGN1P05114 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
HMGN1P05114 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGN1P05114 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.36□□□□□ -0.27
HMGN1P05114 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.36□□□□□ -0.27
HMGN1P05114 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGN1P05114 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGN1P05114 EIF3FP3-201ENST00000434851 1086 ntBASIC13.36□□□□□ -0.27
HMGN1P05114 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.36□□□□□ -0.27
HMGN1P05114 DOC2GP-202ENST00000514950 1163 ntBASIC13.36□□□□□ -0.27
HMGN1P05114 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGN1P05114 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.36□□□□□ -0.27
HMGN1P05114 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.36□□□□□ -0.27
HMGN1P05114 AC023310.3-201ENST00000557027 670 ntBASIC13.36□□□□□ -0.27
HMGN1P05114 AC100756.1-201ENST00000562736 682 ntBASIC13.36□□□□□ -0.27
HMGN1P05114 AC138749.3-201ENST00000567691 622 ntBASIC13.36□□□□□ -0.27
HMGN1P05114 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HMGN1P05114 AC116165.1-201ENST00000611806 668 ntBASIC13.36□□□□□ -0.27
HMGN1P05114 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HMGN1P05114 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.36□□□□□ -0.27
HMGN1P05114 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGN1P05114 HSPA8P5-201ENST00000456928 2069 ntBASIC13.36□□□□□ -0.27
HMGN1P05114 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
HMGN1P05114 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGN1P05114 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.36□□□□□ -0.27
HMGN1P05114 CICP17-201ENST00000418553 2377 ntBASIC13.36□□□□□ -0.27
HMGN1P05114 AC027612.1-201ENST00000445234 2395 ntBASIC13.36□□□□□ -0.27
HMGN1P05114 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGN1P05114 AL138725.1-201ENST00000407347 1314 ntBASIC13.36□□□□□ -0.27
HMGN1P05114 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.36□□□□□ -0.27
HMGN1P05114 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGN1P05114 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.36□□□□□ -0.27
HMGN1P05114 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGN1P05114 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 CICP16-201ENST00000502609 2813 ntBASIC13.35□□□□□ -0.27
HMGN1P05114 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 AC090643.2-201ENST00000623442 2029 ntBASIC13.35□□□□□ -0.27
HMGN1P05114 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
HMGN1P05114 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 AC131902.2-201ENST00000566892 2172 ntBASIC13.35□□□□□ -0.27
HMGN1P05114 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.35□□□□□ -0.27
HMGN1P05114 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.35□□□□□ -0.27
HMGN1P05114 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HMGN1P05114 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.35□□□□□ -0.27
HMGN1P05114 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HMGN1P05114 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HMGN1P05114 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.35□□□□□ -0.27
HMGN1P05114 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
HMGN1P05114 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.35□□□□□ -0.27
HMGN1P05114 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.35□□□□□ -0.27
HMGN1P05114 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.35□□□□□ -0.27
HMGN1P05114 AC104794.3-201ENST00000566840 1248 ntBASIC13.35□□□□□ -0.27
HMGN1P05114 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 AP005019.2-201ENST00000615104 511 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms